User:Jarle Pahr/Projects: Difference between revisions
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*Go through NGS tutorials. | *Go through NGS tutorials. | ||
*Contribute to CobraPy? | *Contribute to CobraPy? | ||
*Work on ROSALIND problems. | |||
*Work on metabolic model analysis programs. Port to Python. | *Work on metabolic model analysis programs. Port to Python. | ||
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More far out: | More far out: | ||
*Sequence a mesoplasma species? | *Sequence a mesoplasma species? | ||
http://www.imsb.ethz.ch/researchgroup/sauer/Students | |||
Latest revision as of 11:15, 13 July 2013
Suggestions for projects to keep busy and develop skills:
- Genome-scale metabolic model for Rhodococcus opacus PD630
- Genotype yeast strains. Use available information on metabolite production to search for mutated genes. Perhaps using a genome-scale metabolic model?
- Curate/improve genome-scale metabolic model for M. florum.
- Analysis of coupled feedback loops. Go back to that Ferrel article.
- Modelling of evolution in metabolic models. Ask for some references?
- Draw article citation networks on some interesting topics (nested feedback loops, lactate dehydrogenase, stringent response...)
- 16S rDNA analysis. What kind of samples?
- Go through NGS tutorials.
- Contribute to CobraPy?
- Work on ROSALIND problems.
- Work on metabolic model analysis programs. Port to Python.
More far out:
- Sequence a mesoplasma species?
