User:Jarle Pahr/Protein interaction networks
Notes on Protein Interaction Networks (PIN) and relevant databases:
http://bioinfow.dep.usal.es/apid/index.htm
http://www.piercenet.com/method/overview-protein-protein-interaction-analysis
Databases
Biological General Repository for Interaction Datasets (BioGRID): http://thebiogrid.org/
http://cbg.garvan.unsw.edu.au/pina/interactome.stat.do
Biomolecular Interaction Network Database (BIND)/Biomolecular Object Network Database (BOND):
- http://www.ontariogenomics.ca/research/project/62
- http://bond.unleashedinformatics.com/
- http://metadatabase.org/wiki/BIND_-_Biomolecular_Interaction_Network_Database
Curated datasets
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245059/
Literature-curated protein interaction datasets: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2683745/
Addendum: Literature-curated protein interaction datasets: http://www.nature.com/nmeth/journal/v6/n12/full/nmeth1209-934.html
Database of interacting proteins: http://dip.doe-mbi.ucla.edu/dip/Main.cgi
