User:Jonathan Cline/Notebook/Melaminometer/Systems Biology Model: Difference between revisions

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Cell Designer model.
Cell Designer model.


Todo -
* promoters
* kinetics - rate equations


http://88proof.com/synthetic_biology/img/melaminometer20081027a.png
http://88proof.com/synthetic_biology/img/melaminometer20081027a.png

Revision as of 00:32, 4 November 2008

Melaminometer Model

Reaction Equations

Balanced equations:

Melamine:

C3H6N6 + H2O --(melamine deaminase)--> C3H5N5O (ammeline) + NH3

Ammeline:

C3H5N5O + H2O --(ammeline aminohydrolase)--> C3H4N4O2 (ammelide) + NH3

Ammelide:

C3H4N4O2 + H2O --(ammelide aminohydrolase)--> C3H3N3O3 (cyanurate) + NH3

Cyanuric acid:

C3H3N3O3 + H2O --(cyanurate amidohydrolase)--> C2H5N3O2 (biuret) + CO2

Biuret:

C2H5N3O2 + H2O --(biuret hydrolase)--> C2H4N2O3 (urea-1-carboxylate) + NH3

Urea-1-carboxylate:

C2H4N2O3 + H2O --(allophanate hydrolase) --> 2NH3 + 2CO2

Note: Preliminary Work Below

Cell Designer model.

Todo -

  • promoters
  • kinetics - rate equations

http://88proof.com/synthetic_biology/img/melaminometer20081027a.png