User:Jose Fabricio Lopez/Notebook/GEDF/2012/09/12: Difference between revisions
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</code> | </code> | ||
=====Prediction of 0bp away===== | =====Prediction of 0bp away===== | ||
'''Submission''' | |||
<code> | <code> | ||
Prediction job ID: predds5qadkd | Prediction job ID: predds5qadkd | ||
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Ignore conflictes with other strand: false | Ignore conflictes with other strand: false | ||
</code> | |||
'''Results''' | |||
<code> | |||
---------------------------------------- | |||
Wed Sep 12 22:28:30 CEST 2012 - Message: | |||
---------------------------------------- | |||
Details of your job: | |||
Prediction job ID: predds5qadkd | |||
Parameter archive: parameters.tar.gz | |||
Genome file: IntergenicFasta.fna | |||
User set UTR prediction: false | |||
Report genes on: both strands | |||
Alternative transcripts: none | |||
Allowed gene structure: predict any number of (possibly partial) genes | |||
Ignore conflictes with other strand: false | |||
</code> | </code> | ||
Revision as of 13:29, 12 September 2012
Gene Expression and Development in Fungi | <html><img src="http://openwetware.org/images/9/94/Report.png" border="0" /></html> Main project page <html><img src="/images/c/c3/Resultset_previous.png" border="0" /></html>Previous entry<html> </html>Next entry<html><img src="/images/5/5c/Resultset_next.png" border="0" /></html> |
Trichoderma & P. vulgaris interactionThings to doThings doneLoogbookIntergenic sequences in T.atrovirideThings to do
Things done
LoogbookBLAST btwn t.at.both vs ncrna
Augus pred vs TrichodermaFrozen
BLAST e-value 1e-3In order to get more hits I run blast again. e-value 1e-3. It is made just in case. Between Agustus predicted and T.at.v2.aa JGI ESTs trainning
Prediction of 0bp awaySubmission
Extras |