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 Gene Expression and Development in Fungi
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Trichoderma & P. vulgaris interaction
Things to do
Things done
Loogbook
- Many beans are contaminated with fungi. :( sadly we need to wait for a new opportunity and new set to measuer VOCs.
Intergenic sequences in T.atroviride
Things to do
- Analyze 20 matches.
- Correct mistakes in coordinates in 0bp file. run Blast to overview check.
- Run analysis again with FilteringBLASTsFromAugustusPredictions.R in /Scripts & Data.
Things done
- Analyzed.
- Corrected.
- Re-analyzing.
Loogbook
- Just 20 hits. Seems there is something wrong. I see the coordinates in 0bp file and they are wrong!!! in file GettingSequences.R (I cant find the Script were I extract 0,480,1020,770), but this one works. And I create the file IntergenicFastaCorrected.fas (extracts just 0bp seqs).
- Re-analysing.
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Gene Expression and Development in Fungi
