User:Jose Fabricio Lopez/Notebook/GEDF/2012/10/11

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===Loogbook===
===Loogbook===
*VOCs collected, not measured yet.
*VOCs collected, not measured yet.
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*Plants were measured.
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*Plants were dried 72°C 4 hrs and measured.
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<table id="Table 1" border="1" cellpadding="3" cellspacing="0">
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{| {{table}}
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<tr>
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| align="center" style="background:#f0f0f0;"|
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<td rowspan=1 colspan=1></td>
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| align="center" style="background:#f0f0f0;"|'''B.L'''
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<th><tt>BigL</tt></th>
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| align="center" style="background:#f0f0f0;"|'''S.L'''
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<th><tt>SmallL</tt></th>
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| align="center" style="background:#f0f0f0;"|'''W.L'''
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<th><tt>W.L.</tt></th>
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| align="center" style="background:#f0f0f0;"|'''W.S'''
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<th><tt>W.S.</tt></th>
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|-
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</tr>
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| align="center" style="background:#f0f0f0;"|'''C1'''
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<tr>
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| 5||3||1.12gr||.61gr
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<th><tt>C1</tt></th>
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|-
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<th><tt>5</tt></th>
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| align="center" style="background:#f0f0f0;"|'''C2'''
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<th><tt>3</tt></th>
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| 5||2||.87gr||.49gr
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<th><tt>1.12gr</tt></th>
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|-
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<th><tt>.61gr</tt></th>
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| align="center" style="background:#f0f0f0;"|'''C3'''
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</tr>
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| 5||2||1.2gr||.71gr
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<tr>
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|-
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<th><tt>C2</tt></th>
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| align="center" style="background:#f0f0f0;"|'''T1'''
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<th><tt>5</tt></th>
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| 6||3||1.22gr||.75gr
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<th><tt>2</tt></th>
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|-
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<th><tt>.87gr</tt></th>
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| align="center" style="background:#f0f0f0;"|'''T2'''
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<th><tt>.49gr</tt></th>
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| 6||3||.98gr||.53gr
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</tr>
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|-
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<tr>
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| align="center" style="background:#f0f0f0;"|'''T3'''
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<th><tt>C3</tt></th>
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| 6||3||1.28gr||1.04gr
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<th><tt>5</tt></th>
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|}
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<th><tt>2</tt></th>
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<th><tt>1.2gr</tt></th>
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*TotalW Control: 4.99gr
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<th><tt>.71gr</tt></th>
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*TotalW T.at:    5.74gr
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</tr>
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We need a bigger sample.
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<tr>
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<th><tt>T1</tt></th>
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<th><tt>6</tt></th>
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<th><tt>3</tt></th>
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<th><tt>1.22gr</tt></th>
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<th><tt>.75gr</tt></th>
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</tr>
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<tr>
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<th><tt>T2</tt></th>
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<th><tt>6</tt></th>
+
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<th><tt>3</tt></th>
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<th><tt>.98gr</tt></th>
+
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<th><tt>.53gr</tt></th>
+
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</tr>
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-
<tr>
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<th><tt>T3</tt></th>
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<th><tt>6</tt></th>
+
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<th><tt>3</tt></th>
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<th><tt>1.28gr</tt></th>
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<th><tt>1.04gr</tt></th>
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</tr>
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==Intergenic sequences in T.atroviride==
==Intergenic sequences in T.atroviride==
====Things to do====
====Things to do====
-
 
+
*Compare Coordinates of augustus pred with .gtf.
====Things done====
====Things done====
-
 
+
*Comparing.
===Loogbook===
===Loogbook===
 +
*As I can see and the results shows, prediction with JGI vs 454 is indifferent.
==Extras==
==Extras==
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Current revision

Gene Expression and Development in Fungi Main project page
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Contents

Trichoderma & P. vulgaris interaction

Things to do

Things done

  • Collected.

Loogbook

  • VOCs collected, not measured yet.
  • Plants were dried 72°C 4 hrs and measured.
B.L S.L W.L W.S
C1 531.12gr.61gr
C2 52.87gr.49gr
C3 521.2gr.71gr
T1 631.22gr.75gr
T2 63.98gr.53gr
T3 631.28gr1.04gr
  • TotalW Control: 4.99gr
  • TotalW T.at: 5.74gr

We need a bigger sample.

Intergenic sequences in T.atroviride

Things to do

  • Compare Coordinates of augustus pred with .gtf.

Things done

  • Comparing.

Loogbook

  • As I can see and the results shows, prediction with JGI vs 454 is indifferent.

Extras
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