User:Juan M. Pedraza: Difference between revisions

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==Contact Info==
[[Image:JMP.jpg|thumb|right|Juan M. Pedraza ]]


==Contact Info==
Juan Manuel Pedraza Leal<Br>
[[Image:OWWEmblem.png|thumb|right|Juan M. Pedraza (an artistic interpretation)]]
University of the Andes<Br>
Carrera 1 N° 18A - 12 <Br>
Biophysics Lab, IP404<Br>
Bogotá, Colombia, South America <Br>
[[Special:Emailuser/Juan M. Pedraza|Email me through OpenWetWare]]


*Juan Manuel Pedraza Leal
*University of the Andes
*Carrera 1 N° 18A - 12
*Biophysics Lab, IP404
*Bogotá, Colombia, South America
*[[Special:Emailuser/Juan M. Pedraza|Email me through OpenWetWare]]


My lab is in the Biophysics Group, part of the Physics Department at the University of the Andes in Bogotá, Colombia.
My lab is in the Biophysics Group, part of the Physics Department at the University of the Andes in Bogotá, Colombia.
Line 14: Line 14:
== Research Interests ==
== Research Interests ==
<blockquote>  
<blockquote>  
Stochasticity in signalling and gene expression<br>
*Stochasticity in gene expression and signaling
Phenotypic variability as survival strategy<br>
*Phenotypic variability as survival strategy
Control in synthetic genetic circuits<br>
*Control in synthetic genetic circuits
Evolution of social behaviour (for now, in microorganisms)<br>
*Evolution of social behaviour (for now, in microorganisms)
Anomalous diffusion, symbolic dynamics and hamiltonian chaos<br>
*Anomalous diffusion, symbolic dynamics and hamiltonian chaos
</blockquote>
</blockquote>


Line 36: Line 36:
==Publications==
==Publications==


<biblio> Sci2
<biblio>  
Sci2
        
        
          Effects of molecular memory and bursting on fluctuations in gene expression<br>
    Effects of molecular memory and bursting on fluctuations in gene expression<br>
                J.M. Pedraza and J. Paulsson<br>
    J.M. Pedraza and J. Paulsson<br>
                Science, 319, 339  (2008).
    Science, 319, 339  (2008).


</biblio>
Nat
<biblio> Nat


        Stochastic gene expression out-of-steady-state in the cyanobacterial circadian clock<br>
    Stochastic gene expression out-of-steady-state in the cyanobacterial circadian clock<br>
                J.R. Chabot, J.M. Pedraza, P. Luitel and A. van Oudenaarden<br>
    J.R. Chabot, J.M. Pedraza, P. Luitel and A. van Oudenaarden<br>
                Nature, 450, 1249 (2007).
    Nature, 450, 1249 (2007).


</biblio>
PNAS
<biblio> PNAS


Predicting stochastic gene expression dynamics in single cells<br>
    Predicting stochastic gene expression dynamics in single cells<br>
     J.T. Mettetal, D. Muzzey, J.M. Pedraza, E.M. Ozbudak and A. van Oudenaarden<br>
     J.T. Mettetal, D. Muzzey, J.M. Pedraza, E.M. Ozbudak and A. van Oudenaarden<br>
     PNAS USA, 103, 7304, (2006).
     PNAS USA, 103, 7304, (2006).
</biblio>
<biblio>Book1


        Noise in gene regulatory networks<br>
Book1
              J. M. Pedraza and A. van Oudenaarden<br>
 
              In Complex Systems Science in BioMedicine (Springer, New York,  2006).
    Noise in gene regulatory networks<br>
</biblio>
    J. M. Pedraza and A. van Oudenaarden<br>
<biblio>Sci1
    In Complex Systems Science in BioMedicine (Springer, New York,  2006).
 
Sci1
 
    Noise propagation in gene networks<br>
    J. M. Pedraza and A. van Oudenaarden<br>
    Science, 307,1965 (2005).
 
PRE


Noise propagation in gene networks<br>
    Non regular languages in the kicked rotor <br>
              J. M. Pedraza and A. van Oudenaarden<br>
    P.-M. Binder and J. M. Pedraza <br>
              Science, 307,1965 (2005).
    Physical Review E, 62, R5883 (2000).  
</biblio>
<biblio>PRE


          Non regular languages in the kicked rotor <br>
AJP
              P.-M. Binder and J. M. Pedraza <br>
              Physical Review E, 62, R5883 (2000).
</biblio>
<biblio>AJP


          An invertibility paradox <br>
    An invertibility paradox <br>
              P.-M. Binder, J. M. Pedraza, and S. Garzon. <br>
    P.-M. Binder, J. M. Pedraza, and S. Garzon. <br>
              American Journal of Physics, 67, 1091 (1999)  
    American Journal of Physics, 67, 1091 (1999)  
</biblio>
</biblio>


==Useful links==
==Useful links==
*Biophysics Group at Uniandes: http://biofisica.uniandes.edu.co/
*[http://biofisica.uniandes.edu.co/| Biophysics Group at Uniandes]
*[[Paulsson|Paulsson Lab at Harvard]]: http://paulsson.med.harvard.edu/
*[http://paulsson.med.harvard.edu/| Paulsson|Paulsson Lab at Harvard]
*vanOudenaarden Lab at MIT: http://web.mit.edu/biophysics
*[http://web.mit.edu/biophysics| VanOudenaarden Lab at MIT]
*[http://scienti.colciencias.gov.co:8081/cvlac/visualizador/generarCurriculoCv.do?cod_rh=0000001817| CvLAC]
 
 
 
<br><br>
[[Biophysics_Lab:Lab_Members|Return to Lab members]]<br>

Latest revision as of 07:28, 13 August 2020

Contact Info

Juan M. Pedraza

Juan Manuel Pedraza Leal
University of the Andes
Carrera 1 N° 18A - 12
Biophysics Lab, IP404
Bogotá, Colombia, South America
Email me through OpenWetWare


My lab is in the Biophysics Group, part of the Physics Department at the University of the Andes in Bogotá, Colombia.

Research Interests

  • Stochasticity in gene expression and signaling
  • Phenotypic variability as survival strategy
  • Control in synthetic genetic circuits
  • Evolution of social behaviour (for now, in microorganisms)
  • Anomalous diffusion, symbolic dynamics and hamiltonian chaos

Education

Harvard University , Boston, MA

Postdoctoral Research Fellow in Systems Biology, 2006-10

Massachusetts Institute of Technology, Cambridge, MA

Ph.D. in Physics, Feb. 2006.

University of the Andes, Bogota, Colombia

B.Sc. in Mathematics (4 year program), 2000.

B.Sc. in Physics (5 year program), 1999.

Publications

  1. Effects of molecular memory and bursting on fluctuations in gene expression

        J.M. Pedraza and J. Paulsson
    
    Science, 319, 339  (2008).

    Nat 

        Stochastic gene expression out-of-steady-state in the cyanobacterial circadian clock
    
    J.R. Chabot, J.M. Pedraza, P. Luitel and A. van Oudenaarden
    
    Nature, 450, 1249 (2007).

    PNAS 

       Predicting stochastic gene expression dynamics in single cells
    
   J.T. Mettetal, D. Muzzey, J.M. Pedraza, E.M. Ozbudak and A. van Oudenaarden
    
   PNAS USA, 103, 7304, (2006).

    Book1 

        Noise in gene regulatory networks
    
    J. M. Pedraza and A. van Oudenaarden
    
    In Complex Systems Science in BioMedicine (Springer, New York,  2006).

    Sci1 

        Noise propagation in gene networks
    
    J. M. Pedraza and A. van Oudenaarden
    
    Science, 307,1965 (2005).

    PRE 

        Non regular languages in the kicked rotor 
    
    P.-M. Binder and J. M. Pedraza 
    
    Physical Review E, 62, R5883 (2000).

    AJP 

        An invertibility paradox 
    
    P.-M. Binder, J. M. Pedraza, and S. Garzon. 
    
    American Journal of Physics, 67, 1091 (1999)
    [Sci2]

Useful links




Return to Lab members

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