User:Kam D. Dahlquist

From OpenWetWare

(Difference between revisions)
Jump to: navigation, search
(Contact Info: added office hours)
(Publications: updated list with BioPax and Ogando papers)
Line 33: Line 33:
<!-- Replace the PubMed ID's ("pmid=#######") below with the PubMed ID's for your publications.  You can add or remove lines as needed -->
<!-- Replace the PubMed ID's ("pmid=#######") below with the PubMed ID's for your publications.  You can add or remove lines as needed -->
<biblio>
<biblio>
-
#Paper1 Dionisio, JDN and Dahlquist, KD ''Improving the Computer Science in Bioinformatics Through Open Source Pedagogy'' SIGCSE Bulletin 2008 Jun; 40(2) 115-9. doi:10.1145/1383602.1383648 [http://portal.acm.org/citation.cfm?id=1383648&jmp=cit&coll=portal&dl=ACM&CFID=74660743&CFTOKEN=75759974# Abstract]
+
#Paper1 pmid=20829833
-
#Paper2 pmid=17588266
+
#Paper2 pmid=20577653
-
#Paper3 pmid=18428731
+
#Paper3 Dionisio, JDN and Dahlquist, KD ''Improving the Computer Science in Bioinformatics Through Open Source Pedagogy'' SIGCSE Bulletin 2008 Jun; 40(2) 115-9. doi:10.1145/1383602.1383648 [http://portal.acm.org/citation.cfm?id=1383648&jmp=cit&coll=portal&dl=ACM&CFID=74660743&CFTOKEN=75759974# Abstract]
-
#Paper4 pmid=14980020
+
#Paper4 pmid=17588266
-
#Paper5 pmid=12540299
+
#Paper5 pmid=18428731
-
#Paper6 pmid=11984561
+
#Paper6 pmid=14980020
-
#Paper7 pmid=10860719
+
#Paper7 pmid=12540299
-
#Paper8 pmid=9931247
+
#Paper8 pmid=11984561
-
#Paper9 pmid=8893854
+
#Paper9 pmid=10860719
-
#Paper10 pmid=8643361
+
#Paper10 pmid=9931247
 +
#Paper11 pmid=8893854
 +
#Paper12 pmid=8643361
</biblio>
</biblio>

Revision as of 13:16, 11 October 2010

Contents

Contact Info

Kam D. Dahlquist, Ph.D.
Associate Professor
Department of Biology
Loyola Marymount University
1 LMU Drive, MS8220
Los Angeles, CA 90045 

I am the head of the Dahlquist Lab at Loyola Marymount University. I learned about OpenWetWare through a Google search when I was searching for a protocol online. I've joined because I run a lab with undergraduates at a primarily undergraduate institution and would like to post my protocols and supply lists online for easy access and to share them with the community.

Office Hours Spring 2010

MWF 10:00 AM - 12:00 PM

Office: Seaver 218

Education

  • 2000, PhD, University of California, Santa Cruz
  • 1993, BA, Pomona College

Research interests

  1. XMLPipeDB: A Reusable, Open Source Tool Chain for Building Relational Databases from XML Sources; creating MAPPs and Gene Databases for the GenMAPP software
  2. The Global Transcriptional Response of Saccharomyces cerevisiae to Cold Shock and Recovery
  3. Mathematical Modeling of the Transcriptional Network Controlling the Environmental Stress Response in Saccharomyces cerevisiae
  4. Identifying Soil Bacteria and Biochemical Pathways in the Ballona Wetlands for the Bioremediation of Organic Pollutants

Publications

  1. Demir E, Cary MP, Paley S, Fukuda K, Lemer C, Vastrik I, Wu G, D'Eustachio P, Schaefer C, Luciano J, Schacherer F, Martinez-Flores I, Hu Z, Jimenez-Jacinto V, Joshi-Tope G, Kandasamy K, Lopez-Fuentes AC, Mi H, Pichler E, Rodchenkov I, Splendiani A, Tkachev S, Zucker J, Gopinath G, Rajasimha H, Ramakrishnan R, Shah I, Syed M, Anwar N, Babur O, Blinov M, Brauner E, Corwin D, Donaldson S, Gibbons F, Goldberg R, Hornbeck P, Luna A, Murray-Rust P, Neumann E, Ruebenacker O, Samwald M, van Iersel M, Wimalaratne S, Allen K, Braun B, Whirl-Carrillo M, Cheung KH, Dahlquist K, Finney A, Gillespie M, Glass E, Gong L, Haw R, Honig M, Hubaut O, Kane D, Krupa S, Kutmon M, Leonard J, Marks D, Merberg D, Petri V, Pico A, Ravenscroft D, Ren L, Shah N, Sunshine M, Tang R, Whaley R, Letovksy S, Buetow KH, Rzhetsky A, Schachter V, Sobral BS, Dogrusoz U, McWeeney S, Aladjem M, Birney E, Collado-Vides J, Goto S, Hucka M, Le Novère N, Maltsev N, Pandey A, Thomas P, Wingender E, Karp PD, Sander C, and Bader GD. . pmid:20829833. PubMed HubMed [Paper1]
  2. Ogando DG, Dahlquist KD, Alizadeh M, Kunchithapautham K, Li J, Yu N, LaVail MM, Rohrer B, Vollrath D, and Danciger M. . pmid:20577653. PubMed HubMed [Paper2]
  3. Dionisio, JDN and Dahlquist, KD Improving the Computer Science in Bioinformatics Through Open Source Pedagogy SIGCSE Bulletin 2008 Jun; 40(2) 115-9. doi:10.1145/1383602.1383648 Abstract [Paper3]
  4. Salomonis N, Hanspers K, Zambon AC, Vranizan K, Lawlor SC, Dahlquist KD, Doniger SW, Stuart J, Conklin BR, and Pico AR. . pmid:17588266. PubMed HubMed [Paper4]
  5. Dahlquist KD. . pmid:18428731. PubMed HubMed [Paper5]
  6. Segal MR, Dahlquist KD, and Conklin BR. . pmid:14980020. PubMed HubMed [Paper6]
  7. Doniger SW, Salomonis N, Dahlquist KD, Vranizan K, Lawlor SC, and Conklin BR. . pmid:12540299. PubMed HubMed [Paper7]
  8. Dahlquist KD, Salomonis N, Vranizan K, Lawlor SC, and Conklin BR. . pmid:11984561. PubMed HubMed [Paper8]
  9. Dahlquist KD and Puglisi JD. . pmid:10860719. PubMed HubMed [Paper9]
  10. Recht MI, Douthwaite S, Dahlquist KD, and Puglisi JD. . pmid:9931247. PubMed HubMed [Paper10]
  11. Recht MI, Fourmy D, Blanchard SC, Dahlquist KD, and Puglisi JD. . pmid:8893854. PubMed HubMed [Paper11]
  12. Dahlquist K and Puglisi JD. . pmid:8643361. PubMed HubMed [Paper12]
All Medline abstracts: PubMed HubMed

Useful links

Personal tools