User:Karmella Haynes/Notebook/BioBrick cloning/2015/01/27: Difference between revisions
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|style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;">Karmella's BioBrick Cloning</span> | |style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;">Karmella's BioBrick Cloning</span> | ||
|style="background-color: #F2F2F2" align="center"| | |style="background-color: #F2F2F2" align="center"|[[File:Report.png|frameless|link={{#sub:{{FULLPAGENAME}}|0|-11}}]][[{{#sub:{{FULLPAGENAME}}|0|-11}}|Main project page]]<br />{{#if:{{#lnpreventry:{{FULLPAGENAME}}}}|[[File:Resultset_previous.png|frameless|link={{#lnpreventry:{{FULLPAGENAME}}}}]][[{{#lnpreventry:{{FULLPAGENAME}}}}{{!}}Previous entry]] }}{{#if:{{#lnnextentry:{{FULLPAGENAME}}}}|[[{{#lnnextentry:{{FULLPAGENAME}}}}{{!}}Next entry]][[File:Resultset_next.png|frameless|link={{#lnnextentry:{{FULLPAGENAME}}}}]]}} | ||
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* Gel purification - KAH60 vector PCR, ATF2 PCR | * Gel purification - KAH60 vector PCR, ATF2 PCR | ||
* PCR - re-amplify KAH 60 vector | * PCR - re-amplify KAH 60 vector | ||
* Review LCR procedure from Cameron: http://openwetware.org/wiki/Haynes_Lab:Notebook/Engineering_PC-TFs/2014/12/22 | |||
---- | ---- | ||
'''Gel purification'''<br> | '''Gel purification'''<br> | ||
* Gel purify fragments from PCR done on http://openwetware.org/wiki/User:Karmella_Haynes/Notebook/BioBrick_cloning/2015/01/22 | * Gel purify fragments from PCR done on [http://openwetware.org/wiki/User:Karmella_Haynes/Notebook/BioBrick_cloning/2015/01/22 01/22/15] | ||
* KAH60/pcVN - | * KAH60/pcVN - 6637 bp | ||
* ATF2 - 960 | * ATF2 - 960 bp | ||
'''PCR''' | |||
* Use purified KAH60 fragments as template for PCR | |||
# KAH60 "backbone" (without VP64, includes scars) = 6637: KAH60 F1/ KAH60 R1 | |||
{| {{table}} | |||
{| {{table}} cellspacing="3" <!-- PCR rxn. table --> | |||
|- valign="top" | |- valign="top" | ||
| bgcolor=#cfcfcf | Reagent | | bgcolor=#cfcfcf | Reagent | ||
| bgcolor=#cfcfcf | | | bgcolor=#cfcfcf | Rxn1 | ||
| rowspan="7" | | | rowspan="7" | Expected:<br>1. KAH60 = 6637 | ||
| rowspan="7" | | | rowspan="7" | [[Image:KAH012715_gel.jpg|270px|Hover name]]<br>10 μL/lane, 1% agarose; [http://openwetware.org/wiki/Image:KAH_Fermentas_GeneRuler_1kbplus.jpg Ladder] | ||
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| | | Template || 1.0 | ||
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| | | 10 uM fwd primer || 1.0 | ||
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| | | 10 uM rev primer || 1.0 | ||
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| | | 2x GoTaq green || 12.5 | ||
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| dH<sub>2</sub>O || 9.5 | | dH<sub>2</sub>O || 9.5 | ||
|- | |- | ||
| || | | || 25.0 | ||
|} | |} | ||
Program: GOTAQ35cyc | |||
* 95°C, 3 min | |||
* 30x[95°C, 1 min; 57°C, 1 min; 72°C, 3 min] | |||
* 72°C, 3 min | |||
* 4°C ∞ | |||
Latest revision as of 00:41, 27 September 2017
Karmella's BioBrick Cloning | Main project page Previous entry Next entry | ||||||||||||||||
01/27/15
Gel purification
PCR
Program: GOTAQ35cyc
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