User:Karmella Haynes/Notebook/PcTF Genomics

Illumina ChIP-seq

• ChIP DNA prep for Illumina:
  • Experimental samples - 12/13/11, 12/14/11, 12/19/11
  • Input DNA - 01/25/13
• Fasta --> BAM files: Mark Teng from the Dinu lab (TGEN)
• Enrichment analysis (DNASTAR software)
  • BAM --> peaks/ enrichment histograms workflow 12/13/2012
  • BAM --> wig files for UCSC browser workflow 01/07/2013

Cell Type Study

• Carly Hom - Express PcTF (KAH126) in K-562 and SK-N-SH

Recent changes