User:Karmella Haynes/Notebook/PcTF Genomics/2012/12/26
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* Completed PcTF (lane 1) and PcTF mock (lane 2) BAM --> assembly workflow | * Completed PcTF (lane 1) and PcTF mock (lane 2) BAM --> assembly workflow | ||
* Open in SeqMan pro to see raw values for four genes from 2011 paper. | * Open in SeqMan pro to see raw values for four genes from 2011 paper. | ||
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Workflow | Workflow | ||
* Go to the [http://genome.ucsc.edu/cgi-bin/hgGateway UCSC genome browser]. Select Feb. 2009 GRCh37/hg19. | * Go to the [http://genome.ucsc.edu/cgi-bin/hgGateway UCSC genome browser]. Select Feb. 2009 GRCh37/hg19. | ||
| - | * | + | * Enter the gene name. Click [Submit]. |
| + | * Record the chromosome number and coordinates. | ||
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1. Name: CDKN2A, Coordinates: chr9: 21,967, 751..21,975,132 | 1. Name: CDKN2A, Coordinates: chr9: 21,967, 751..21,975,132 | ||
Revision as of 18:47, 26 December 2012
 Pc-TF Genomics
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12/26/12
ChIP: PcTF vs. PcTF mock
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