User:Karmella Haynes/Notebook/PcTF Genomics/2013/01/07: Difference between revisions
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# Create binding proteins: Click [Create Binding Protein]. Binding protein label = the name of the protein that was pulled down by the antibody via ChIP. Binding site type = Unknown. Click [OK]. | # Create binding proteins: Click [Create Binding Protein]. Binding protein label = the name of the protein that was pulled down by the antibody via ChIP. Binding site type = Unknown. Click [OK]. | ||
# Assign Binding Proteins to Experiments: Protein label = the appropriate binding protein (created in previous step). Click [Next >]. | # Assign Binding Proteins to Experiments: Protein label = the appropriate binding protein (created in previous step). Click [Next >]. | ||
# Setup Preprocessing: Desired preprocessing = QSeq; Normalization method = none; Sequence files against which to quantify = browse to Desktop > Human Genome Ref > select all NC...gbk files. | |||
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# Set control 2_ and 7_aln_sorted as "yes" for "Is control?" | # Set control 2_ and 7_aln_sorted as "yes" for "Is control?" | ||
# Set 2_aln_sorted as control for 1_aln_sorted. Set 7_aln_sorted as control for 6_aln_sorted. | # Set 2_aln_sorted as control for 1_aln_sorted. Set 7_aln_sorted as control for 6_aln_sorted. | ||
Revision as of 19:39, 7 January 2013
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01/07/13
Array Star analysis
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