User:Karmella Haynes/Notebook/PcTF Genomics/2015/08/12: Difference between revisions

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# Gal4EED-luc: H380_MV11 + g034_pSPgRNA
# Gal4EED-luc: H380_MV11 + g034_pSPgRNA
# Gal4EED-luc: H380_MV11 (no gRNA)
# Gal4EED-luc: H380_MV11 (no gRNA)
* Run two gels (1-6 and 7-12)




'''SDS-PAGE'''
'''SDS-PAGE'''
* Protocol: http://openwetware.org/wiki/Haynes:PAGE
* Protocol: http://openwetware.org/wiki/Haynes:PAGE
* Gel: Nupage 4-12% Bis-Tris
* Gel: Nupage 4-12% Bis-Tris (12 wells)
* Buffer: NuPAGE® MOPS SDS
* Buffer: NuPAGE® MOPS SDS
* Chamber: Invitrogen XCell SureLock
* Chamber: Invitrogen XCell SureLock
* Protein standard:
* Protein sample prep:  
* Protein sample prep:  
** Final volume = 20 μL
** Sample buffer:
Add protein samples to 1.5 mL tubes. Dilute the stock proteins in an appropriate buffer. Make sure the protein sample volume = the final volume - (concentrated sample buffer volume + 1.0 μL 1M DTT)
Example 1: 20 μL final loading volume - (5.0 μL 4x sample buffer + 1.0 μL 1M DTT) = 14.0 μL protein
Example 1: 20 μL final loading volume - (10.0 μL 2x sample buffer + 1.0 μL 1M DTT) = 9.0 μL protein
Calculate the number of lanes used = protein samples + protein standard(s). If this is less than the total number of lanes, prepare "dummy" samples (sample buffer + DTT + water) to fill empty wells
Heat samples, excluding the protein standard(s), @ 100°C/ 5 min. Cool at room temp.





Revision as of 16:01, 12 August 2015

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08/12/15

  • Castone Western - gel and transfers

Castone Western - gel and transfers

  1. Luc14: H340_MV11 + g034_pSPgRNA
  2. Luc14: H340_MV11 (no gRNA)
  3. Luc14: H360_MV11 + g034_pSPgRNA
  4. Luc14: H360_MV11 (no gRNA)
  5. Luc14: H380_MV11 + g034_pSPgRNA
  6. Luc14: H380_MV11 (no gRNA)
  7. Gal4EED-luc: H340_MV11 + g034_pSPgRNA
  8. Gal4EED-luc: H340_MV11 (no gRNA)
  9. Gal4EED-luc: H360_MV11 + g034_pSPgRNA
  10. Gal4EED-luc: H360_MV11 (no gRNA)
  11. Gal4EED-luc: H380_MV11 + g034_pSPgRNA
  12. Gal4EED-luc: H380_MV11 (no gRNA)


SDS-PAGE

  • Protocol: http://openwetware.org/wiki/Haynes:PAGE
  • Gel: Nupage 4-12% Bis-Tris (12 wells)
  • Buffer: NuPAGE® MOPS SDS
  • Chamber: Invitrogen XCell SureLock
  • Protein standard:
  • Protein sample prep:
    • Final volume = 20 μL
    • Sample buffer:


Add protein samples to 1.5 mL tubes. Dilute the stock proteins in an appropriate buffer. Make sure the protein sample volume = the final volume - (concentrated sample buffer volume + 1.0 μL 1M DTT) Example 1: 20 μL final loading volume - (5.0 μL 4x sample buffer + 1.0 μL 1M DTT) = 14.0 μL protein Example 1: 20 μL final loading volume - (10.0 μL 2x sample buffer + 1.0 μL 1M DTT) = 9.0 μL protein Calculate the number of lanes used = protein samples + protein standard(s). If this is less than the total number of lanes, prepare "dummy" samples (sample buffer + DTT + water) to fill empty wells Heat samples, excluding the protein standard(s), @ 100°C/ 5 min. Cool at room temp.