User:Lance Martin: Difference between revisions
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*Harvard/BU 2004 iGem Int/Xis inversion switch | *Harvard/BU 2004 iGem Int/Xis inversion switch | ||
**Their final presentation | **Their final presentation | ||
[[Media:iGem.ppt]] | ***[[Media:iGem.ppt]] | ||
**My notes on this work | **My notes on this work | ||
[[Media:iGemLance.ppt]] | ***[[Media:iGemLance.ppt]] | ||
*DNA methylation switch | *DNA methylation switch | ||
Revision as of 14:55, 23 March 2009
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Electronic memory & logic devices
Devices
- Transistors
- Logic gates
- Latches
- D-type flip-flops
- JK flip-flops
Summary presentation
Media:Electronic_Memory_&_Logic_Devices.ppt
Electronic counters & system architecture
Architectures
- Cascade
- Asynchronous
- Synchronous
Summary presentation
Native biological memory & logic
Basic requirements
- Reliably holds state
- Controllable state change
- Many additional application-specific requirements
Systems
- Recombination
- Types of enzymes
- Kinetic modeling recombinase mechanism
- DNA methylation
- Others?
- Feedback loops
- Bi-stable networks
Design of engineered biological memory & logic
Basic construction / design principles
- Summary of reviews by
- Voight
- Endy
- Arkin
Computational modeling
- Review of
- Collins toggle switch
- Elowitz repressilator
Engineered biological memory & logic
Of particular interest to us
- Ham & Arkin inversion switch
- Harvard/BU 2004 iGem Int/Xis inversion switch
- Their final presentation
- My notes on this work
- DNA methylation switch
