User:Lance Martin: Difference between revisions
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*DNA methylation switch | *DNA methylation switch | ||
== | ==My projects== | ||
*[[ | [[Image:Gemini.jpg|thumb|right|LacZ alpha-GFP fusion]] | ||
*[[ | |||
===Gemini=== | |||
*Summary | |||
**[[Media:Gemini.ppt]] | |||
*synBERC poster | |||
**[[Media:Poster.ppt]] | |||
*Current focus | |||
Revision as of 15:00, 23 March 2009
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Electronic memory & logic devices
Devices
- Transistors
- Logic gates
- Latches
- D-type flip-flops
- JK flip-flops
Summary presentation
Media:Electronic_Memory_&_Logic_Devices.ppt
Electronic counters & system architecture
Architectures
- Cascade
- Asynchronous
- Synchronous
Summary presentation
Native biological memory & logic
Basic requirements
- Reliably holds state
- Controllable state change
- Many additional application-specific requirements
Systems
- Recombination
- Types of enzymes
- Kinetic modeling recombinase mechanism
- DNA methylation
- Others?
- Feedback loops
- Bi-stable networks
Design of engineered biological memory & logic
Basic construction / design principles
- Summary of reviews by
- Voight
- Endy
- Arkin
Computational modeling
- Review of
- Collins toggle switch
- Elowitz repressilator
Engineered biological memory & logic
Of particular interest to us
- Ham & Arkin inversion switch
- Harvard/BU 2004 iGem Int/Xis inversion switch
- Their final presentation
- My notes on this work
- DNA methylation switch
My projects
Gemini
- Summary
- synBERC poster
- Current focus
