User:Lindenb/Notebook/UMR915/20110510: Difference between revisions
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==Integragen== | |||
Columns:<pre> 1 Position.hg19 | |||
2 chrom | |||
3 sample.ID | |||
4 rs.name | |||
5 hapmap_ref_other | |||
6 X1000Genome.obs | |||
7 X1000Genome.desc | |||
8 Freq.HTZ.ExomesV1 | |||
9 Freq.Hom.ExomesV1 | |||
10 A | |||
11 C | |||
12 G | |||
13 T | |||
14 modified_call | |||
15 total | |||
16 used | |||
17 score | |||
18 reference | |||
19 type | |||
20 Gene.name | |||
21 Gene.start | |||
22 Gene.end | |||
23 strand | |||
24 nbre.exon | |||
25 refseq | |||
26 typeannot | |||
27 type.pos | |||
28 index.cdna | |||
29 index.prot | |||
30 Taille.cdna | |||
31 Intron.start | |||
32 Intron.end | |||
33 codon.wild | |||
34 aa.wild | |||
35 codon.mut | |||
36 aa.mut | |||
37 cds.wild | |||
38 cds.mut | |||
39 prot.wild | |||
40 prot.mut | |||
41 mirna | |||
42 region.splice</pre> |
Revision as of 07:52, 10 May 2011
Integragen
Columns:
1 Position.hg19 2 chrom 3 sample.ID 4 rs.name 5 hapmap_ref_other 6 X1000Genome.obs 7 X1000Genome.desc 8 Freq.HTZ.ExomesV1 9 Freq.Hom.ExomesV1 10 A 11 C 12 G 13 T 14 modified_call 15 total 16 used 17 score 18 reference 19 type 20 Gene.name 21 Gene.start 22 Gene.end 23 strand 24 nbre.exon 25 refseq 26 typeannot 27 type.pos 28 index.cdna 29 index.prot 30 Taille.cdna 31 Intron.start 32 Intron.end 33 codon.wild 34 aa.wild 35 codon.mut 36 aa.mut 37 cds.wild 38 cds.mut 39 prot.wild 40 prot.mut 41 mirna 42 region.splice