User:Madeleine Y. Bee/Notebook/Single Molecule Fluorescence/2013/06/10

From OpenWetWare

(Difference between revisions)
Jump to: navigation, search
(June 10, 2013)
(June 10, 2013)
Line 22: Line 22:
<br.>
<br.>
Use 0.0094g NaH<sub>2</sub>PO<sub>4</sub> and 1.19188g Na<sub>2</sub>HPO<sub>4</sub> in 1L water.<br.>
Use 0.0094g NaH<sub>2</sub>PO<sub>4</sub> and 1.19188g Na<sub>2</sub>HPO<sub>4</sub> in 1L water.<br.>
-
 
+
===New: Modifying Silica-Coated AuNPs with HS-DNA Procedure===
 +
*Combine 150μL AuNPs@SiO<sub>2</sub>, 15μL APS and 235μL ethanol
 +
*Vortex solution for 30 minutes
 +
*Rinse sample three times by centrifugation at 7700g with ethanol and two times with sodium phosphate buffer, pH 9 (SPB)
 +
*Make a separate solution of 1 mg sulfo-SMCC in 400μL of SPB
 +
*Add SSMCC solution to AuNP solution
 +
*Vortex for 1 hour
 +
*Rinse twice with SPB
 +
*Rinse twice with potassium phosphate buffer, pH 7.4 (KPB)
 +
*Combine sample with 50μL 20μM HS-DNA
 +
*Vortex for 1 hour
 +
*Rinse three times with KPB
 +
*Re-suspend in 150μL KPB
<!-- ##### DO NOT edit below this line unless you know what you are doing. ##### -->
<!-- ##### DO NOT edit below this line unless you know what you are doing. ##### -->

Revision as of 10:40, 10 June 2013

Silica-coating Reaction Main project page
Previous entry      Next entry

June 10, 2013

  • Silica-coating procedure from 05/24/2013 performed
    • MHA attachment performed, silica-coating reaction to be performed tomorrow

Buffer Preparation and Calculations

Sodium phosphate buffer, pH 9, to be used for the modification of HS-DNA and AuNPs@SiO2 procedure.
monosodium phosphate- MW: 119.98g/mol
disodium phosphate- MW: 141.96g/mol, pKA: 6.82
buffer- pH 9,concentration 10mM

9=6.82+log([base]/[acid])
151.36=(10-[base])/([acid])
[acid](151.36+1)=10
[acid]=0.066mM
[base]=9.935mM

Use 0.0094g NaH2PO4 and 1.19188g Na2HPO4 in 1L water.

New: Modifying Silica-Coated AuNPs with HS-DNA Procedure

  • Combine 150μL AuNPs@SiO2, 15μL APS and 235μL ethanol
  • Vortex solution for 30 minutes
  • Rinse sample three times by centrifugation at 7700g with ethanol and two times with sodium phosphate buffer, pH 9 (SPB)
  • Make a separate solution of 1 mg sulfo-SMCC in 400μL of SPB
  • Add SSMCC solution to AuNP solution
  • Vortex for 1 hour
  • Rinse twice with SPB
  • Rinse twice with potassium phosphate buffer, pH 7.4 (KPB)
  • Combine sample with 50μL 20μM HS-DNA
  • Vortex for 1 hour
  • Rinse three times with KPB
  • Re-suspend in 150μL KPB


Personal tools