User:Matthew Whiteside/Notebook/Malaria Microarray/Tasks/Task4

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TASK4: Meta-analysis of human malaria microarray data

Notes

  • This task is a continuation of Task3

Goals

  • Identify human genes involved (activated/repressed) in malaria pathogenesis using meta-analysis

To Do List

  1. Prepare gene expression data matrix for meta-analysis
    Entries
  2. Perform RankProd meta-analysis for identification of DE genes across studies
    • This to-do item has been abandoned - MAID method will be used instead. MAID accounts for variation within & between sets.
  3. Perform MAID meta-analysis for identification of DE genes across studies
    Entries
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