User:Mohammad H. Dezfulian: Difference between revisions

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==Contact Info==
*Mohammad Dezfulian, PhD
*[http://elledgelab.med.harvard.edu/?page_id=253 Elledge Laboratory ]
*Department of Genetics
*Harvard Medical School
*T: (617) 524-4514
*E: mdezfulian (at) hms.harvard.edu
*W: [https://connects.catalyst.harvard.edu/Profiles/display/Person/134057 Harvard Catalyst] [https://www.linkedin.com/in/mohammad-dezfulian-b3a684100 LinkedIn]
== Publications ==


<h3><font style="color:#000600;">Mohammad Dezfulian :</font></h3>
[http://www.ncbi.nlm.nih.gov/pubmed/?term=(dezfulian+m)+and+(Sardari+S)+OR+(Dezfulian+MH) Search Pubmed for an updated list of publications]


=== Peer Reviewed ===
1. Sardari, S. and '''Dezfulian, MH.''' (2005) Evaluation of SAR for Amphotericin B Derivatives by Artificial Neural Network. '''''Tropical Journal of Pharmaceutical Research''''' [https://dl.dropboxusercontent.com/u/43366175/14628-13779-1-PB.pdf Link]


==Contact Info==
2. Sardari, S. and '''Dezfulian, MH.''' (2007) Cheminformatics in anti-infective agent discovery. '''''Mini Review in Medicinal Chemistry''''' [https://dl.dropboxusercontent.com/u/43366175/medicinal-chemistry2010.pdf Link]
 
3. '''Dezfulian, MH.''' Soulliere, DM. Dhaliwal, RK. Sareen, M. Crosby, WL. (2012) The SKP1-Like Gene Family of Arabidopsis Exhibits a High Degree of Differential Gene Expression and Gene Product Interaction during Development. '''''Plos One''''', [http://www.plosone.org/article/fetchObject.action?uri=info%3Adoi%2F10.1371%2Fjournal.pone.0050984&representation=PDF Link]


Mohammad Dezfulian<br>
4. Maleki, M. '''Dezfulian MH'''. Rueda, L.  A Computational Domain-Based Feature Grouping Approach for Prediction of Stability of SCF Ligases. (2015)'' '''Bioinformatics and Biomedical Engineering''''' [http://link.springer.com/chapter/10.1007/978-3-319-16483-0_61 Link]
Department of Biological Sciences<br>
University of Windsor<br>
401 Sunset Avenue<br>
Windsor, ON<br> 
N9B 3P4<br>
Canada<br>
T: (519) 253-3000 x4755  <br>
F: (519) 971-3609<br>
E: hajdez(at)uwindsor(dot)ca<br>


==Education==
5. Khalili, S. Rahbar, MR. '''Dezfulian, MH.''' Jahangiri, A. In silico analyses of Wilms’ tumor protein to designing a novel multi-epitope DNA vaccine against cancer. (2015) '''''Journal of Theoretical Biology''''' [http://linkinghub.elsevier.com/retrieve/pii/S0022-5193(15)00202-7 Link]
<!--Include info about your educational background-->
* 2006-Present, PhD Candidate, [http://www.uwindsor.ca U of Windsor] Molecular Biology
* 2002-2006, BSc, [http://www.scu.ac.ir/homepage.aspx?site=DouranPortal&lang=en-US&tabid=0 Chamran University of Ahvaz] Cell and Molecular Biology


==Awards/Honours==
6.      '''Dezfulian, MH.''' Jall, E.  Roberto, D.K.A.  Moss, B.M. Khoo, K. Nemhauser, J.L. Crosby W.L.  Oligomerization of SCF TIR1 is essential for Aux/IAA degridation  and Auxin signaling in Arabidopsis. (2016) '''''PLoS Genetics''''' [http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006301 Link]
* University of Windsor Graduate Student Society Award 2011-12
* Golden Key International Honours Society 2011
* University of Windsor International Student Society Award 2010-11
* Department of Biological Sciences Graduate Excellence Award 2009-10
* University of Windsor Graduate Excellence Scholarship 2008-11
* University of Windsor International Graduate Scholarship 2006-11


==Research interests==
7.      '''Dezfulian, MH.'''  Foreman, C. Jall, E.  Pal, M.  Dhaliwal, R. K.  Roberto, D.K. Crosby, W.L. Acetolactate synthase regulatory subunits can sense different concentrations of valine and play divergent but overlapping roles throughout the development of Arabidopsis. (2016) '''''BMC Plant Biology''''' [[Link]]
<!-- Feel free to add brief descriptions to your research interests as well -->
# Protein Ubiquitination
# Identification of SCF Ubiquitin Ligase Substrates
# Genome annotation


==Peer Reviewed Publications==
=== Non Peer Reviewed ===


1. Sardari, S. and Dezfulian, MH. The Eastern Mediterranean Health Genomics and Biotechnology Network Critical for the Region. (2006) Genetic Engineering News [http://www.genengnews.com/keywordsandtools/print/1/11775/ Link]
==Academic Honors/Fellowships==
*2012-2013 Queen Elizabeth II Graduate Scholarship in Science and Technology


# Sardari, S.and '''Dezfulian, M'''. (2007) Cheminformatics in anti-infective agents discovery. ''Mini Review in Medicinal Chemistry.''<br><br>
*2012 Conference Travel Award,University of Windsor, Department of Graduate Studies
# Sardari, S.and '''Dezfulian, M'''. (2005) Evaluation of SAR for Amphotericin B Derivatives by Artificial Neural Network. ''Tropical Journal of Pharmaceutical Research''
<br/>
Search [http://www.ncbi.nlm.nih.gov/pubmed?term=(Dezfulian%20m%20and%20Sardari%20s%20)%20or%20dezfulian%20MH%20 Pubmed] for more recent publications


==Non-Peer Reviewed Publications==
*2011-2012 Graduate Student Society Award University of Windsor, Graduate Student Society                                                                                                                                  


# Sardari, S. and '''Dezfulian, M'''. (2006) The Eastern Mediterranean Health Genomics and Biotechnology Network Critical for the Region,'' Genetic Engineering News''
*2011-Present Golden Key International Honor Society


<br/>
*2010-2011 International Student Society Award University of Windsor, International student of the year award
<br/>
*2009-2010 Department of Biological Sciences Graduate Excellence Award University of Windsor,'' '''Excellence in Research'''''
<br/>
'''
*2008-2012 Graduate Excellence Scholarship University of Windsor, Department of Graduate Studies


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*2008 Conference Travel Award University of Windsor, Department of Graduate Studies
*2006-2012 International Graduate Scholarship University of Windsor, Department of Graduate Studies


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== Conference Presentations & Proceedings ==
 
1. Bioactivity and chemical informatics of modeled microtubule inhibitors: Identification of key features and design of new agents in the treatment of cancer. (2005)  Sardari, S. '''Dezfulian, MH.'''
''TETRAHEDRON SYMPOSIUM 2005 Challenges in Organic Chemistry, Paris''
 
2. Synthetic strategies in protecting group selection and compound library design by informatics modeled group chemistry and neural networking. (2005) Sardari, S. Zolfaghari Jooya, H. '''Dezfulian MH.''' Omidi, M.
''TETRAHEDRON SYMPOSIUM 2005 Challenges in Organic Chemistry, Paris''
 
3. Molecular informatics, QSPR and computer modeling of microtubule inhibitors: Identification of key features and design of new agents in the treatment of tuberculosis. (2005) '''Dezfulian, MH.''' Sardari, S.
''34th International Scientific Meeting of the Directors of Pasteur Institute, Tehran''
 
4. QSPR modeling of Gyrase inhibitors of Trypanosoma: Identification of new agents. (2005) '''Dezfulian, MH.''' Jalili, E. Sardari, S.
''First National Congress on Molecular Microbiology Karaj''
 
5. A computer based model for anti Topoisomearse II compounds, a novel approach for evaluation of anti-cancer drugs. (2005) '''Dezfulian, MH.''' Jalili, E. Sardari, S.
''First International Congress of Biology & 13th National Congress of Biology, Rasht''
 
6. Artificial Neural Networks in Cheminformatics.* (2005) '''Dezfulian, MH.'''
''Research Day, Chamran, University of Ahvaz '' Invited Speaker
 
7. Molecular Modelling of Methionyl-tRNA Synthetase Inhibitors in Staphylococcus aureus. (2005) Jalili, E. Dezfulian MH. Sardari, S.
''1st Student Conference of Biotechnology, Tehran ''
 
8. A screening study of hereditary nonpolyposis colorectal cancer (HNPCC), by Microsatellite marker analysis in Khorasan Province of Iran. (2006) Ahmadi, A.  Galehdari, H. '''Dezfulian, MH.'''
''International Medical Genetic Conference, Kuwait'' 
 
9. A Neural Network based model for evaluation of Anti-malarial Drugs. (2006)  Sardari, S.  Galehdari, H. Jalili, E. Dezfulian, MH.
International Pharmaceutical Sciences Congress, Tehran
 
10. Functional Analysis of SKP1 genes in Arabidopsis thaliana. (2008) '''Dezfulian, MH.''' Crosby, WL.
''19th International Conference on Arabidopsis Research , Montreal'' [https://www.arabidopsis.org/servlets/TairObject?type=publication&id=501728110 Abstract]
 
11. From Protein Complex to Supra-Complex. (2011)  Crosby, WL.  '''Dezfulian, MH.''' Dinatale, C.
''International Conference on Biomedical Ontology (ICBO), Buffalo, NY'' [http://icbo.buffalo.edu/2011/slides/Thursday%20Protein_Panel/protein-complex_crosby_v4_jul2011.pptx PPT]
 
12. E3-Ubiquitin Ligases as a Use-Case Scenario For Developing Quaternary Protein Complex Ontologies (2012) Crosby, WL.  Dezfulian, MH. Dinatale, C. ''Plant and Animal Genome XX Conference, San Diego'' [https://pag.confex.com/pag/xx/webprogram/Paper1868.html Abstract]
 
13. Identification of Ubiquitinated proteins in Arabidopsis thaliana using Protein Microarrays (2012) '''Dezfulian MH,''' Roberto DKA, Popescu SC, Crosby WL
''ICSB-2012 - The 13th International Conference on Systems Biology, Toronto, Canada''
 
14. Ab initio Assembly, Annotation and Analysis of the Phaseolus var. OAC-REX Genome (2012) Dinatale C, Platts A, '''Dezfulian MH''', Perry G, Pauls KP,  Crosby WL
''Phaseomics-The Genome conference, Guanajuato, Mexico'' [http://datos.langebio.cinvestav.mx/~aherrera/phaseomics/Abstract_Book.pdf Abstract]
 
15. Computational Analysis of Domain Interactions in Stability of Protein-protein Interactions (2014) Maleki M., '''Dezfulian MH''', Crosby WL, Rueda L.
''18th Annual International Conference on Research in Computational Molecular Biology, Pittsburgh, Pennsylvania'' [http://cdn.f1000.com/posters/docs/261044063 Poster]
 
16.  Computational Analysis of the Stability of SCF Ligases Employing Domain Information (2014) Maleki M.,Rueda L, '''Dezfulian MH'''., and Crosby WL,  ''5th ACM Conf. on Bioinformatics, Computational Biology and Health Informatics'' (ACMBCB), CA
 
17. A Computational Domain-based Feature Grouping Approach for Prediction of Stability of SCF Ligases (2015)  Maleki, M.  '''Dezfulian, MH''' and Rueda L,  ''3rd Interanational Work-conference on Bioinformatics and Biomedical Engineering (IWBBIO)'', Granada, Spain,
 
18. Computational modeling of the effect of amino acid substitutions on the formation of Ubiquitin-based complexes (2015) Maleki, M.  '''Dezfulian, MH''' and Rueda L, 19th Annual International Conference on Research in Computational Molecular Biology, Warsaw, Poland [http://www.recomb2015.pl/accepted-posters Poster]

Revision as of 06:31, 3 February 2017

Contact Info

Publications

Search Pubmed for an updated list of publications

Peer Reviewed

1. Sardari, S. and Dezfulian, MH. (2005) Evaluation of SAR for Amphotericin B Derivatives by Artificial Neural Network. Tropical Journal of Pharmaceutical Research Link

2. Sardari, S. and Dezfulian, MH. (2007) Cheminformatics in anti-infective agent discovery. Mini Review in Medicinal Chemistry Link

3. Dezfulian, MH. Soulliere, DM. Dhaliwal, RK. Sareen, M. Crosby, WL. (2012) The SKP1-Like Gene Family of Arabidopsis Exhibits a High Degree of Differential Gene Expression and Gene Product Interaction during Development. Plos One, Link

4. Maleki, M. Dezfulian MH. Rueda, L. A Computational Domain-Based Feature Grouping Approach for Prediction of Stability of SCF Ligases. (2015) Bioinformatics and Biomedical Engineering Link

5. Khalili, S. Rahbar, MR. Dezfulian, MH. Jahangiri, A. In silico analyses of Wilms’ tumor protein to designing a novel multi-epitope DNA vaccine against cancer. (2015) Journal of Theoretical Biology Link

6. Dezfulian, MH. Jall, E. Roberto, D.K.A. Moss, B.M. Khoo, K. Nemhauser, J.L. Crosby W.L. Oligomerization of SCF TIR1 is essential for Aux/IAA degridation and Auxin signaling in Arabidopsis. (2016) PLoS Genetics Link

7. Dezfulian, MH. Foreman, C. Jall, E. Pal, M. Dhaliwal, R. K. Roberto, D.K. Crosby, W.L. Acetolactate synthase regulatory subunits can sense different concentrations of valine and play divergent but overlapping roles throughout the development of Arabidopsis. (2016) BMC Plant Biology Link

Non Peer Reviewed

1. Sardari, S. and Dezfulian, MH. The Eastern Mediterranean Health Genomics and Biotechnology Network Critical for the Region. (2006) Genetic Engineering News Link

Academic Honors/Fellowships

  • 2012-2013 Queen Elizabeth II Graduate Scholarship in Science and Technology
  • 2012 Conference Travel Award,University of Windsor, Department of Graduate Studies
  • 2011-2012 Graduate Student Society Award University of Windsor, Graduate Student Society
  • 2011-Present Golden Key International Honor Society
  • 2010-2011 International Student Society Award University of Windsor, International student of the year award
  • 2009-2010 Department of Biological Sciences Graduate Excellence Award University of Windsor, Excellence in Research

  • 2008-2012 Graduate Excellence Scholarship University of Windsor, Department of Graduate Studies
  • 2008 Conference Travel Award University of Windsor, Department of Graduate Studies
  • 2006-2012 International Graduate Scholarship University of Windsor, Department of Graduate Studies

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Conference Presentations & Proceedings

1. Bioactivity and chemical informatics of modeled microtubule inhibitors: Identification of key features and design of new agents in the treatment of cancer. (2005) Sardari, S. Dezfulian, MH. TETRAHEDRON SYMPOSIUM 2005 Challenges in Organic Chemistry, Paris

2. Synthetic strategies in protecting group selection and compound library design by informatics modeled group chemistry and neural networking. (2005) Sardari, S. Zolfaghari Jooya, H. Dezfulian MH. Omidi, M. TETRAHEDRON SYMPOSIUM 2005 Challenges in Organic Chemistry, Paris

3. Molecular informatics, QSPR and computer modeling of microtubule inhibitors: Identification of key features and design of new agents in the treatment of tuberculosis. (2005) Dezfulian, MH. Sardari, S. 34th International Scientific Meeting of the Directors of Pasteur Institute, Tehran

4. QSPR modeling of Gyrase inhibitors of Trypanosoma: Identification of new agents. (2005) Dezfulian, MH. Jalili, E. Sardari, S. First National Congress on Molecular Microbiology Karaj

5. A computer based model for anti Topoisomearse II compounds, a novel approach for evaluation of anti-cancer drugs. (2005) Dezfulian, MH. Jalili, E. Sardari, S. First International Congress of Biology & 13th National Congress of Biology, Rasht

6. Artificial Neural Networks in Cheminformatics.* (2005) Dezfulian, MH. Research Day, Chamran, University of Ahvaz Invited Speaker

7. Molecular Modelling of Methionyl-tRNA Synthetase Inhibitors in Staphylococcus aureus. (2005) Jalili, E. Dezfulian MH. Sardari, S. 1st Student Conference of Biotechnology, Tehran

8. A screening study of hereditary nonpolyposis colorectal cancer (HNPCC), by Microsatellite marker analysis in Khorasan Province of Iran. (2006) Ahmadi, A. Galehdari, H. Dezfulian, MH. International Medical Genetic Conference, Kuwait

9. A Neural Network based model for evaluation of Anti-malarial Drugs. (2006) Sardari, S. Galehdari, H. Jalili, E. Dezfulian, MH. International Pharmaceutical Sciences Congress, Tehran

10. Functional Analysis of SKP1 genes in Arabidopsis thaliana. (2008) Dezfulian, MH. Crosby, WL. 19th International Conference on Arabidopsis Research , Montreal Abstract

11. From Protein Complex to Supra-Complex. (2011) Crosby, WL. Dezfulian, MH. Dinatale, C. International Conference on Biomedical Ontology (ICBO), Buffalo, NY PPT

12. E3-Ubiquitin Ligases as a Use-Case Scenario For Developing Quaternary Protein Complex Ontologies (2012) Crosby, WL. Dezfulian, MH. Dinatale, C. Plant and Animal Genome XX Conference, San Diego Abstract

13. Identification of Ubiquitinated proteins in Arabidopsis thaliana using Protein Microarrays (2012) Dezfulian MH, Roberto DKA, Popescu SC, Crosby WL ICSB-2012 - The 13th International Conference on Systems Biology, Toronto, Canada

14. Ab initio Assembly, Annotation and Analysis of the Phaseolus var. OAC-REX Genome (2012) Dinatale C, Platts A, Dezfulian MH, Perry G, Pauls KP, Crosby WL Phaseomics-The Genome conference, Guanajuato, Mexico Abstract

15. Computational Analysis of Domain Interactions in Stability of Protein-protein Interactions (2014) Maleki M., Dezfulian MH, Crosby WL, Rueda L. 18th Annual International Conference on Research in Computational Molecular Biology, Pittsburgh, Pennsylvania Poster

16. Computational Analysis of the Stability of SCF Ligases Employing Domain Information (2014) Maleki M.,Rueda L, Dezfulian MH., and Crosby WL, 5th ACM Conf. on Bioinformatics, Computational Biology and Health Informatics (ACMBCB), CA

17. A Computational Domain-based Feature Grouping Approach for Prediction of Stability of SCF Ligases (2015) Maleki, M. Dezfulian, MH and Rueda L, 3rd Interanational Work-conference on Bioinformatics and Biomedical Engineering (IWBBIO), Granada, Spain,

18. Computational modeling of the effect of amino acid substitutions on the formation of Ubiquitin-based complexes (2015) Maleki, M. Dezfulian, MH and Rueda L, 19th Annual International Conference on Research in Computational Molecular Biology, Warsaw, Poland Poster

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