User:Niti Vanee: Difference between revisions
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==Publications== | ==Publications== | ||
# Reprogramming Microbial Metabolic Pathways. Chapter 3: Evolutionary Engineering for Industrial Microbiology. Vanee N, Fisher AB and Fong SS. Subcellular Biochemistry, Vol. 64, ISBN 978-94-007-5054-8. PMID 23080245 | # Reprogramming Microbial Metabolic Pathways. Chapter 3: Evolutionary Engineering for Industrial Microbiology. Vanee N, Fisher AB and Fong SS. Subcellular Biochemistry, Vol. 64, ISBN 978-94-007-5054-8. PMID 23080245 | ||
# Identification of Metabolic Changes in Genetically Unstable Stem Cells by Using Model Analysis of Gene Expression. Vanee N, Roberts SB, Riggs MJ, Rao RR, Fong SS. Chem Biodivers. 2012 May; 9 (5):911-29. PMID 22589092 | # Identification of Metabolic Changes in Genetically Unstable Stem Cells by Using Model Analysis of Gene Expression. Vanee N, Roberts SB, Riggs MJ, Rao RR, Fong SS. Chem Biodivers. 2012 May; 9 (5):911-29. PMID 22589092 | ||
# A Genome-Scale Metabolic Model of Cryptosporidium hominis. Vanee N, Roberts SB, Fong SS, Manque P, Buck GA. Chem Biodivers. 2010 May; 7(5):1026-39. PMID 20491062 <br /> | # A Genome-Scale Metabolic Model of Cryptosporidium hominis. Vanee N, Roberts SB, Fong SS, Manque P, Buck GA. Chem Biodivers. 2010 May; 7(5):1026-39. PMID 20491062 <br /> | ||
'''Manuscript under processing:''' | *'''Manuscript under processing:''' | ||
**Vanee N, Brooks JP, Fong SS. 2013. Genome scale metabolic model for cellulolytic actenomycetes ''Thermobifida fusca'' | ** Vanee N, Brooks JP, Fong SS. 2013. Genome scale metabolic model for cellulolytic actenomycetes ''Thermobifida fusca'' | ||
**Vanee N, Spencer V, Krokhin O, Wilkins J, Fong SS. 2013. Proteomic characterization of ''T. fusca'' under cellobiose and avicel media formulation | ** Vanee N, Spencer V, Krokhin O, Wilkins J, Fong SS. 2013. Proteomic characterization of ''T. fusca'' under cellobiose and avicel media formulation | ||
**Vanee N, Fong SS. 2013. Metabolomic profiling for cellulolytic actenomycetes ''T. fusca'' | ** Vanee N, Fong SS. 2013. Metabolomic profiling for cellulolytic actenomycetes ''T. fusca'' | ||
**Vanee N, Brooks JP, Fong SS. 2013. In silico characterization and product optimization for terpenoids production in ''T. fusca'' | ** Vanee N, Brooks JP, Fong SS. 2013. In silico characterization and product optimization for terpenoids production in ''T. fusca'' | ||
==Useful links== | ==Useful links== | ||
*[[OpenWetWare:Welcome|Introductory tutorial]] | *[[OpenWetWare:Welcome|Introductory tutorial]] | ||
*[[Help|OpenWetWare help pages]] | *[[Help|OpenWetWare help pages]] | ||
Revision as of 11:51, 25 July 2013
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Niti Vanee
I am a trained Systems Biologist and Bioinformatician with the highly desirable skills of high-throughput data scientist specializing in transcriptomics, proteomics and metabolomics. My research project involves exploring the metabolic capability of prokaryotes for the application in health (published work), therapeutics (published work), pharmaceutical ingredients, and biofuel production (in process). I aim towards using my training, experience and skills towards the application that can be directly related to common people's benefit.
Contact Info
Systems Biological Engineering Laboratory
Virginia Commonwealth University
601 W. Main Street
P.O. Box 843068
Richmond, VA, USA
vaneen@vcu.edu
Education
- Ph.D. in Life Sciences (Systems Biology) from Virginia Commonwealth University (Present) : Advisor: Dr. Stephen S. Fong
- M.S. in Bioinformatics from Virginia Commonwealth University (2009) : Advisor: Dr. Gregory A. Buck
- B.E. in Biotechnology from UP Technical University (2006)
Research Interest
- Systems Biology
- Metabolic Modeling
- High-throughput data Analysis
- Microbiology
Special Courses
- Clinical and Translations Medicine, National Institute of Health, 2013
- Business and Entrepreneurship for Life Scientists, 2011
- Advanced Algorithms in Systems Biology, 2008
- Statistical Methods for Microarray Analysis using R, 2008
- Networks Biology, 2008
Awards
- Travel award from VCU Graduate School for Conference on 4th ASM Conference at San Antonio, TX. 2012
- Travel award for the ESF-EMBO Conference on Synthetic Biology of Antibiotic Production, Spain. 2011
- Travel Award at 110th ASM Annual General Meeting, San Diego, California. 2010
- Awarded Most Outstanding Graduate Master of Sciences in Bioinformatics, VCU, Richmond, VA, USA. 2009
- Awarded Graduate School Dissertation Scholarship VCU, Richmond, VA, USA. 2009
- Nominated member of The Honor Society of Phi Kappa Phi in 2008 VCU, Richmond, VA, USA. 2008
- Bioinformatics Departmental Scholarship for Academic Excellence VCU, Richmond, VA, USA. 2007-2008
Publications
- Reprogramming Microbial Metabolic Pathways. Chapter 3: Evolutionary Engineering for Industrial Microbiology. Vanee N, Fisher AB and Fong SS. Subcellular Biochemistry, Vol. 64, ISBN 978-94-007-5054-8. PMID 23080245
- Identification of Metabolic Changes in Genetically Unstable Stem Cells by Using Model Analysis of Gene Expression. Vanee N, Roberts SB, Riggs MJ, Rao RR, Fong SS. Chem Biodivers. 2012 May; 9 (5):911-29. PMID 22589092
- A Genome-Scale Metabolic Model of Cryptosporidium hominis. Vanee N, Roberts SB, Fong SS, Manque P, Buck GA. Chem Biodivers. 2010 May; 7(5):1026-39. PMID 20491062
- Manuscript under processing:
- Vanee N, Brooks JP, Fong SS. 2013. Genome scale metabolic model for cellulolytic actenomycetes Thermobifida fusca
- Vanee N, Spencer V, Krokhin O, Wilkins J, Fong SS. 2013. Proteomic characterization of T. fusca under cellobiose and avicel media formulation
- Vanee N, Fong SS. 2013. Metabolomic profiling for cellulolytic actenomycetes T. fusca
- Vanee N, Brooks JP, Fong SS. 2013. In silico characterization and product optimization for terpenoids production in T. fusca
