User:Nkuldell/SAGA vs Swi/Snf

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in progress...

SAGA subunits, S. cerevisiae

most strains listed in Martens, Wu, Winston G&D paper 2005 [[1]]
link to FW yeast strain collection [[2]]
Parent strain for 109 deletion analysis:

Ada subunits size,chromosome,null p-type deletion strain genotype
Ada1 (aka HFI1, SUP110, SRM12, GAN1) [[3]] 1.467 kb/489 aa,
Chr. XVI, viable
Ada2 (aka SWI8) [[4]] 1.305 kb/434aa,
Chr. IV, viable
Ada3 (aka NGG1, SWI7) [[5]] 2.109 kb/702aa,
Chr. IV, viable
Gcn5 (aka ADA4, SWI9) [[6]] 1.32 kb/439aa,
Chr. VII, viable
Ada5 (aka SPT20) [[7]] 1.815 kb/604aa,
Chr. XV, viable
Spt subunits size, chromosome, null p-type deletion strain genotype
Spt3 [[8]] 1.014 kb/337aa,
Chr. IV, viable
Spt7 (aka GIT2) [[9]] 3.999 kb/1332aa,
Chr. II, viable
Spt8 [[10]] 1.809 kb/602aa,
Chr. XII, viable
Spt20 (aka Ada5) [[11]] same as Ada5
1.815 kb/604aa, Chr. XV, viable
TAF subunits, cerevisiae </i> size, chromosome, null p-type
TAF5 (aka TAF90) [[12]] 2.397 kb/798aa, Chr. II, inviable
TAF6 (aka TAF60) [[13]] 1.551 kb/516aa, Chr. VII, inviable
TAF9 (aka TAF17) [[14]] 0.474 kb/157aa, Chr. XIII, inviable
TAF10 (aka TAF23, TAF25) [[15]] 0.621 kb/206aa, Chr. IV, inviable
TAF12 (aka TAF61, TAF68) [[16]] 1.620 kb/539aa, Chr. IV, inviable
Tra1 subunit size, chromosome, null p-type
Tra1 [[17]] 11.235 kb/3744aa, Chr. VIII, inviable
other subunits size, chromosome, null p-type deletion strain genotype
Sgf73 [[18]] 1.974 kb/657aa, Chr. VII , viable
Sgf29 [[19]] 0.779 kb/259aa, Chr. III, viable
Sgf11 [[20]] 0.3 kb/99aa, Chr.XVI, viable
Ubp8 [[21]] 1.416 kb/471aa, Chr. XIII, viable
Sus1 [[22]] gene with intron, Chr. II, viable

SWI/SNF subunits

SWI subunits size,chromosome,null p-type
SWII (aka ADR6, GAM3, LPA1)[[23]] 3945bp/1315 aa, Chr. XVI, inviable
SWI2 (aka GAM1, HAF1, SNF2 , TYE3)[[24]] 5112bp/1704aa, Chr. XV, viable
SWI3 (aka TYE2) [[25]] 2478bp/826aa, Chr. X, viable
SNF subunits size, chromosome, null p-type
SWP subunits size, chromosome, null p-type
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