User:Odom:Schmidt: Difference between revisions
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<font size="3">We recently published a detailed protocol for ChIP-seq for whole tissues and cell lines. | <font size="3">We recently published a detailed protocol for ChIP-seq for whole tissues and cell lines. Furthermore we compared the influence of sequencing depth on peak calling using matched ChIP-chip data from the identical sequencing libraries:</font> | ||
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Revision as of 01:52, 17 May 2009
Odom laboratory
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Dominic Schmidt |
Research
Research InterestsI received my german diplom degree in Biochemistry at the Max Planck Institute for Molecular Genetics in the department for Vertebrate Genomics of Hans Lehrach in the laboratory of Marie-Laure Yaspo. The focus of my research was the analysis of gene regulatory networks, especially for human chromosome 21 encoded transcription factors. For this purpose I worked with ChIP-chip using high density oligonucleotide microarrays and developed ChIP-seq using next generation sequencing technology. We published ChIP-seq for RNA-polymerase II in human cells together with RNA-seq:
We recently published a detailed protocol for ChIP-seq for whole tissues and cell lines. Furthermore we compared the influence of sequencing depth on peak calling using matched ChIP-chip data from the identical sequencing libraries:
My recent research uses ChIP-seq and RNA-seq to understand the rules |
Publications
Miscellaneous
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