User:Pakpoom Subsoontorn/Notebook/Genetically Encoded Memory/2008/10/14: Difference between revisions
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The list of | The list of information fields (need to decide: mining VS experimenting, set priority): | ||
* Recombination | * Enzyme name | ||
* Natural source of enzyme, host | |||
* Coding sequence for enzyme itself | |||
* Enzyme structure: amino acid sequence, functional domain, | |||
* Target DNA sequence: Natural target, | |||
* Natural/synthetic topologies of the target DNA | |||
* Required Axillary factors: | |||
* Recombination Efficiency in standard host | |||
* Recombination speed | * Recombination speed | ||
* Studies in mutated enzyme VS target sequences | |||
* Mechanism: | |||
Parameter we want to tune, | Parameter we want to tune, | ||
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**How long do we have to have enzyme around? | **How long do we have to have enzyme around? | ||
==Classification== | |||
Keywords for classification, which can be overlapped | |||
*Tyrosine recombinase | |||
*Serine recombinase | |||
*Large Serine recombinase | |||
*Integrase | |||
*Excisionase | |||
*Invertase | |||
*Resolvase | |||
*Transposase | |||
*Integron | |||
==Tools== | ==Tools== |
Revision as of 00:24, 20 October 2008
Project name | <html><img src="/images/9/94/Report.png" border="0" /></html> Main project page <html><img src="/images/c/c3/Resultset_previous.png" border="0" /></html>Previous entry<html> </html>Next entry<html><img src="/images/5/5c/Resultset_next.png" border="0" /></html> |
Quantitative functional profiles of site-specific recombinase
Database/method features
Quantitative functional informationThe list of information fields (need to decide: mining VS experimenting, set priority):
Parameter we want to tune,
ClassificationKeywords for classification, which can be overlapped
ToolsInformatics tools
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