User:Pedrobeltrao/Notebook/Structural analysis of phosphorylation sites/Code: Difference between revisions

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==Access==
==Access==


You first need to install a subversion (svn) client. Then check out the latest version of the code:
# You first need to install a subversion (svn) client. Then check out the latest version of the code:
  <code>
  svn checkout http://phospho3d.googlecode.com/svn/trunk/ phospho3d-read-only
  </code>


<code>
  This will create a folder phospho3d-read-only in your current directory.
svn checkout http://phospho3d.googlecode.com/svn/trunk/ phospho3d-read-only
</code>


This will create a folder phospho3d-read-only in your current directory.
  Project members should check out a write-access copy. You will find your personal checkout
  command on the GoogleCode page after signing in:
  http://code.google.com/p/phospho3d/source/checkout
 
# Before running python scripts, you also need to [http://biskit.pasteur.fr/install/short/|install the Biskit library]


Project members should check out a write-access copy. You will find your personal checkout command on the GoogleCode page after signing in:
http://code.google.com/p/phospho3d/source/checkout


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Revision as of 08:54, 26 September 2009

Structural analysis of phosphorylation sites

Code

We are going to use Perl (Pedro) and Python (Raik). The Python code builds on the Biskit library. Our scripts are available through Google Code:

Access

  1. You first need to install a subversion (svn) client. Then check out the latest version of the code:
 
 svn checkout http://phospho3d.googlecode.com/svn/trunk/ phospho3d-read-only
 
 This will create a folder phospho3d-read-only in your current directory.
 Project members should check out a write-access copy. You will find your personal checkout
 command on the GoogleCode page after signing in: 
 http://code.google.com/p/phospho3d/source/checkout
  1. Before running python scripts, you also need to the Biskit library