User:Pedrobeltrao/Notebook/Structural analysis of phosphorylation sites/Code: Difference between revisions

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# Then check out the latest version of the code:
# Then check out the latest version of the code:
   <code>svn checkout http://phospho3d.googlecode.com/svn/trunk/ phospho3d-read-only</code>
   <code>svn checkout http://phospho3d.googlecode.com/svn/trunk/ phospho3d-read-only</code>
  Project members should check out a write-access copy. You will find your personal checkout
#*Project members should check out a write-access copy. You will find your personal checkout
   command on the GoogleCode page after signing in:  
   command on the GoogleCode page after signing in:  
   http://code.google.com/p/phospho3d/source/checkout
   http://code.google.com/p/phospho3d/source/checkout

Revision as of 08:58, 26 September 2009

Structural analysis of phosphorylation sites

Code

We are going to use Perl (Pedro) and Python (Raik). The Python code builds on the Biskit library. Our scripts are available through Google Code:

Access

  1. Install a subversion (svn) client
  2. Then check out the latest version of the code:
 svn checkout http://phospho3d.googlecode.com/svn/trunk/ phospho3d-read-only
    • Project members should check out a write-access copy. You will find your personal checkout
 command on the GoogleCode page after signing in: 
 http://code.google.com/p/phospho3d/source/checkout

  1. Before running python scripts, you also need to the Biskit library


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