User:Richard C. Cronn

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(A Few Articles That Provide Examples Of Our Research)
(A Few Articles That Provide Examples Of Our Research)
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'''Note! All articles are available for free download from TreeSearch, the US Forest Service publication server (http://www.treesearch.fs.fed.us/
'''Note! All articles are available for free download from TreeSearch, the US Forest Service publication server (http://www.treesearch.fs.fed.us/
)'''<br>
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'''A SNP resource for Douglas-fir: de novo transcriptome assembly and SNP detection and validation'''<br>
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''BMC Genomics 2013, 14:137 doi:10.1186/1471-2164-14-137<br>
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GT Howe, J Yu, B Knaus, R Cronn et al.<br>
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[http://www.biomedcentral.com/1471-2164/14/137/abstract| URL] [http://www.biomedcentral.com/content/pdf/1471-2164-14-137.pdf| PDF reprint]
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[[Tara_N._Jennings|Tara N. Jennings]], [[Brian_J._Knaus| Brian J Knaus]], Thomas D. Mullens, Susan M. Haig, [[Richard Cronn]]<br>
[[Tara_N._Jennings|Tara N. Jennings]], [[Brian_J._Knaus| Brian J Knaus]], Thomas D. Mullens, Susan M. Haig, [[Richard Cronn]]<br>
[http://www.treesearch.fs.fed.us/pubs/39939 URL] [http://www.fs.fed.us/pnw/pubs/journals/pnw_2011_jennings001.pdf | PDF reprint]
[http://www.treesearch.fs.fed.us/pubs/39939 URL] [http://www.fs.fed.us/pnw/pubs/journals/pnw_2011_jennings001.pdf | PDF reprint]
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'''Building a model: Developing genomic resources for common milkweed (''Asclepias syriaca'') with low coverage genome sequencing
 
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''BMC Genomics 2011, 12:211, doi:10.1186/1471-2164-12-211<br>
 
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Shannon CK Straub, Mark Fishbein, Tatyana Livshultz et al.<br>
 
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[http://www.biomedcentral.com/1471-2164/12/211 URL] [http://www.biomedcentral.com/content/pdf/1471-2164-12-211.pdf | PDF reprint]
 
'''Mitochondrial genome sequences illuminate maternal lineages of conservation concern in a rare carnivore'''<br>
'''Mitochondrial genome sequences illuminate maternal lineages of conservation concern in a rare carnivore'''<br>

Revision as of 03:46, 5 March 2013

Contents

Contact Info

Cronn in the field (artistic impression)
Cronn in the field (artistic impression)

Richard Cronn
Pacific Northwest Research Station
USDA Forest Service
3200 SW Jefferson Way
Corvallis, OR 97330 USA

I lead research in the Forest Plant Molecular Genetics lab (a.k.a., the Cronn Lab), which is part of the Genetics and Silviculture Team in the Landscape and Watershed Management Program at the PNW Research Station. We're on OpenWetWare to share lab and informatics protocols that are directed primarily at using ultra-high throughput short read sequencers in population genetics and genomics applications.


Education

  • 1997, PhD, Iowa State University, Ames, IA, USA
  • 1991, MSc, University of Montana, Missoula, MT, USA
  • 1986, BS, Drake University, Des Moines, IA, USA

Research Interests

  • Molecular basis of climatic sensing and adaptation in plants
  • Plant population and landscape genetics
  • Chloroplast genome evolution

A Few Articles That Provide Examples Of Our Research

Note! All articles are available for free download from TreeSearch, the US Forest Service publication server (http://www.treesearch.fs.fed.us/ )

A SNP resource for Douglas-fir: de novo transcriptome assembly and SNP detection and validation
BMC Genomics 2013, 14:137 doi:10.1186/1471-2164-14-137
GT Howe, J Yu, B Knaus, R Cronn et al.
URL PDF reprint



Multiplexed microsatellite recovery using massively parallel sequencing
Molecular Ecology Resources 2011, 11(6):1060-1067, doi: 10.1111/j.1755-0998.2011.03033.x
Tara N. Jennings, Brian J Knaus, Thomas D. Mullens, Susan M. Haig, Richard Cronn
URL | PDF reprint

Mitochondrial genome sequences illuminate maternal lineages of conservation concern in a rare carnivore
BMC Ecology 2011, 11:10, doi:10.1186/1472-6785-11-10
Brian J Knaus, Richard Cronn, Aaron Liston, Kristine Pilgrim, Michael K. Schwartz
URL PDF reprint

Finding a (pine) needle in a haystack: chloroplast genome sequence divergence in rare and widespread pines
Molecular Ecology 2010, Feb, 19(s1): 100-114, doi:10.1111/j.1365-294X.2009.04474.x
Justen B. Whittall, John V. Syring, Matthew Parks, Jason Buenrostro, Cindy Dick, Aaron Liston,Richard Cronn
URLPDF reprint

Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes
BMC Biology 2009, 7:84, doi:10.1186/1741-7007-7-84
Matthew Parks, Richard Cronn, Aaron Liston
URL PDF reprint

Other Articles, Not Peer Reviewed

Scientists probe genetic component of climate-hardy species
Land Letter April 28, 2011
URL


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