User:Sean E. Lauber: Difference between revisions
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[http://openwetware.org/wiki/Image:Virus_calculator.xlsx Virus dose calculator] | [http://openwetware.org/wiki/Image:Virus_calculator.xlsx Virus dose calculator] | ||
[http://openwetware.org/wiki/Image:Differential_counting_template.xlsx Cell differential counting template] | |||
==Links== | ==Links== |
Revision as of 10:13, 8 July 2013
Contact Info
- sean.laub@gmail.com
Education
- M.Sc, Medical Sciences (Immunology), McMaster University, Hamilton, ON 2010-2012
- B.Sc, Honors Cell & Molecular Biology, Concordia University, Montreal, QC 2005-2010
- DEC, Natural Sciences, John Abbott College, Montreal, QC 2002-2004
Protocols
Richards Lab Protocols
Molecular Techniques
- Cytokeratin IHC staining
- Fibronectin IHC staining
- IHC development
- ELISA Development
- Isotype ELISA against Adenovirus
- Generating Adenovirus Lysate
- Generating Tissue Lysates
- Bradford Assay
- SDS PAGE Protein Electrophoresis
- Western Blotting
- Flow Cytometry
- PCR
- RNA Extraction Using Trizol
- DNA Extraction Using Trizol
- DNase Treatment Using DNA-Free (for Taqman)
- Reverse Transcription using Superscript II (for Taqman)
- qRT-PCR (TaqMan)
Mammalian Cell Culture
- Freezing Mammalian Cells
- Thawing Mammalian Cells
- Culturing Lewis Lung Carcinoma Cells
- MTT Cell Proliferation Assay
- Cytokine Stimulation of Cells
- Culturing of Primary Macrophages
- Adenovirus infection (in vitro)
Technical
- Agilent Bioanalyzer
- Statistics in Graphpad
- AMIRA - Creating Label Fields by Lung Segmentation
- AMIRA - Generating Histograms
- AMIRA - Density Overlays
- ImageJ - Threshold Analysis
- Using the 7900 HT qPCR Machine
- Using the BDCanto Flow Cytometer
- Heat maps in Excel
Animal Work
- Broncho-alveolar Lavage
- Peritoneal Lavage
- Formalin Fixation & Preparation for Histology
- Mouse Endotracheal Intubation
- Using the Kras G12D Mouse Model for Lung Cancer
- Using the Lewis Lung Carcinoma cell Mouse Model for Lung Cancer
- Kras G12D Genotyping
- Differential cell staining
Joyce Lab Protocols
- DNA Electrophoresis
- Bacterial Transformation
- T-tailing pBSKS
- Ethanol precipitation of DNA
- DNA Phenol extraction
- Preparing RNA from yeast
- Extraction of DNA from an agarose gel
- DNA Ligation
- PCR Mutagenesis
Template excel files
ELISA template and quadratic formula (for use when equation is not linear)
Cell differential counting template
Links
Protocols and general information
- Recipes and protocols for stock solutions, competent cells, mini/midi/maxi prep and more
- Protocol-online Protocols
- Biowww.net Protocols
- Restriction digests
- Restriction digest troubleshooting
- More troubleshooting
- Journal of Visualized Experiments
- PSORT
Useful links
- Bitesize Bio
- BioForum
- Scientist Solutions
- Biochemweb.org
- E. coli Genotypes
- Online Mendelian Inheritance in Man
- NCBI
- Uniprot (as good as NCBI)
- Nebcutter 2.0
- Translate DNA
- Promoter Predictor
- Download the Molecular Biology Toolbar
- Useful IHC optimization tips for paraffin embedded tissue (Abcam)