User:Slokwong: Difference between revisions
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| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=ADA1 Ada1] (aka HFI1, SUP110, SRM12, GAN1) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=ADA1 Ada1] (aka HFI1, SUP110, SRM12, GAN1) | ||
| 1.467 kb/489 aa, Chr. XVI, <br>viable | | 1.467 kb/489 aa, Chr. XVI, <br>viable | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=ADA2 Ada2] (aka SWI8) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=ADA2 Ada2] (aka SWI8) | ||
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| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=ADA3 Ada3](aka NGG1, SWI7) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=ADA3 Ada3](aka NGG1, SWI7) | ||
| 2.109 kb/702aa, Chr. IV, <br>viable | | 2.109 kb/702aa, Chr. IV, <br>viable | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=GCN5 Gcn5] (aka ADA4, SWI9) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=GCN5 Gcn5] (aka ADA4, SWI9) | ||
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| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=spt3 Spt3] | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=spt3 Spt3] | ||
| 1.014 kb/337aa, Chr. IV, <br> viable | | 1.014 kb/337aa, Chr. IV, <br> viable | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=Spt7 Spt7](aka GIT2) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=Spt7 Spt7](aka GIT2) | ||
| 3.999 kb/1332aa, Chr. II, <br> viable | | 3.999 kb/1332aa, Chr. II, <br> viable | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=Spt8 Spt8] | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=Spt8 Spt8] | ||
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| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF5 TAF5] (aka TAF90) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF5 TAF5] (aka TAF90) | ||
| 2.397 kb/798aa, Chr. II, <font color = red>inviable</font color> | | 2.397 kb/798aa, Chr. II, <font color = red>inviable</font color> | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF6 TAF6] (aka TAF60) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF6 TAF6] (aka TAF60) | ||
| 1.551 kb/516aa, Chr. VII, <font color = red>inviable</font color> | | 1.551 kb/516aa, Chr. VII, <font color = red>inviable</font color> | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF9 TAF9] (aka TAF17) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF9 TAF9] (aka TAF17) | ||
| 0.474 kb/157aa, Chr. XIII, <font color = red>inviable</font color> | | 0.474 kb/157aa, Chr. XIII, <font color = red>inviable</font color> | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF10 TAF10] (aka TAF23, TAF25) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF10 TAF10] (aka TAF23, TAF25) | ||
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| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF12 TAF12](aka TAF61, TAF68) | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TAF12 TAF12](aka TAF61, TAF68) | ||
| 1.620 kb/539aa, Chr. IV, <font color = red>inviable</font color> | | 1.620 kb/539aa, Chr. IV, <font color = red>inviable</font color> | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|} | |} | ||
{| border="1" | {| border="1" | ||
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| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TRA1 Tra1] | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=TRA1 Tra1] | ||
| 11.235 kb/3744aa, Chr. VIII, <font color = red>inviable</font color> | | 11.235 kb/3744aa, Chr. VIII, <font color = red>inviable</font color> | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|} | |} | ||
{| border="1" | {| border="1" | ||
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| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=sgf73 Sgf73] | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=sgf73 Sgf73] | ||
| 1.974 kb/657aa, Chr. VII , <br> viable | | 1.974 kb/657aa, Chr. VII , <br> viable | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=sgf29 Sgf29] | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=sgf29 Sgf29] | ||
| 0.779 kb/259aa, Chr. III, <br> viable | | 0.779 kb/259aa, Chr. III, <br> viable | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=sgf11 Sgf11] | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=sgf11 Sgf11] | ||
| 0.3 kb/99aa, Chr.XVI, <br> viable | | 0.3 kb/99aa, Chr.XVI, <br> viable | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=ubp8 Ubp8] | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=ubp8 Ubp8] | ||
| 1.416 kb/471aa, Chr. XIII, <br> viable | | 1.416 kb/471aa, Chr. XIII, <br> viable | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|- | |- | ||
| [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=Sus1 Sus1] | | [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=Sus1 Sus1] | ||
| gene with intron, Chr. II, <br> viable | | gene with intron, Chr. II, <br> viable | ||
| | | ==gene product== <br> | ||
==molecular function== <br> | |||
==systematic deletion== | |||
|} | |} |
Revision as of 11:20, 3 April 2007
Name: Sophie Wong
Major: Course 20
Email: slokwong AT mit DOT edu
User:Slokwong/MODULE 1 : Genome Engineering
Ada subunits | size,chromosome,null p-type | notes |
---|---|---|
Ada1 (aka HFI1, SUP110, SRM12, GAN1) | 1.467 kb/489 aa, Chr. XVI, viable |
==gene product== ==molecular function== systematic deletion |
Ada2 (aka SWI8) | 1.305 kb/434aa, Chr. IV, viable |
==gene product==: Ada histone acetyltransferase complex component,
transcriptional coactivator
|
Ada3(aka NGG1, SWI7) | 2.109 kb/702aa, Chr. IV, viable |
==gene product== ==molecular function== systematic deletion |
Gcn5 (aka ADA4, SWI9) | 1.32 kb/439aa, Chr. VII, viable |
==gene product== Ada histone acetyltransferase complex component molecular function
systematic deletion
|
Ada5 (aka SPT20) | 1.815 kb/604aa, Chr. XV, viable |
same as SPT20 |
Spt subunits | size, chromosome, null p-type | notes |
---|---|---|
Spt3 | 1.014 kb/337aa, Chr. IV, viable |
==gene product== ==molecular function== systematic deletion |
Spt7(aka GIT2) | 3.999 kb/1332aa, Chr. II, viable |
==gene product== ==molecular function== systematic deletion |
Spt8 | 1.809 kb/602aa, Chr. XII, viable |
==gene product== transcription factor molecular function
Systematic deletion
|
Spt20 (aka Ada5) | 1.815 kb/604aa, Chr. XV, viable |
==gene product== histone acetyltransferase SAGA complex member
transcription factor systematic deletions
|
TAF subunits | size, chromosome, null p-type | notes |
---|---|---|
TAF5 (aka TAF90) | 2.397 kb/798aa, Chr. II, inviable | ==gene product== ==molecular function== systematic deletion |
TAF6 (aka TAF60) | 1.551 kb/516aa, Chr. VII, inviable | ==gene product== ==molecular function== systematic deletion |
TAF9 (aka TAF17) | 0.474 kb/157aa, Chr. XIII, inviable | ==gene product== ==molecular function== systematic deletion |
TAF10 (aka TAF23, TAF25) | 0.621 kb/206aa, Chr. IV, inviable | ==gene product== TFIID subunit
TafII25 |
TAF12(aka TAF61, TAF68) | 1.620 kb/539aa, Chr. IV, inviable | ==gene product== ==molecular function== systematic deletion |
Tra1 subunit | size, chromosome, null p-type | notes |
---|---|---|
Tra1 | 11.235 kb/3744aa, Chr. VIII, inviable | ==gene product== ==molecular function== systematic deletion |
other subunits | size, chromosome, null p-type | notes |
---|---|---|
Sgf73 | 1.974 kb/657aa, Chr. VII , viable |
==gene product== ==molecular function== systematic deletion |
Sgf29 | 0.779 kb/259aa, Chr. III, viable |
==gene product== ==molecular function== systematic deletion |
Sgf11 | 0.3 kb/99aa, Chr.XVI, viable |
==gene product== ==molecular function== systematic deletion |
Ubp8 | 1.416 kb/471aa, Chr. XIII, viable |
==gene product== ==molecular function== systematic deletion |
Sus1 | gene with intron, Chr. II, viable |
==gene product== ==molecular function== systematic deletion |