User:Sunny Sharma: Difference between revisions
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==Publications== | ==Publications== | ||
1) | 1) Tuning the ribosome: the influence of rRNA modification on eukaryotic ribosome biogenesis and function.[http://www.tandfonline.com/doi/full/10.1080/15476286.2016.1259781] | ||
2) | 2) Ribosome biogenesis factor Tsr3 is the aminocarboxypropyl transferase responsible for 18S rRNA hypermodification in yeast and humans. [http://nar.oxfordjournals.org/content/early/2016/04/15/nar.gkw244.abstract] | ||
3) | 3)‘View From A Bridge’: A New Perspective on Eukaryotic rRNA Base Modification.[http://www.cell.com/trends/biochemical-sciences/abstract/S0968-0004%2815%2900139-5] | ||
4) | 4) The reverse transcription signature of N-1-methyladenosine in RNA-Seq is sequence dependent.[http://nar.oxfordjournals.org/content/early/2015/09/13/nar.gkv895.full] | ||
5) | 5) Yeast Kre33 and human NAT10 are conserved 18S rRNA cytosine acetyltransferases that modify tRNAs assisted by the adaptor Tan1/THUMPD1.[http://nar.oxfordjournals.org/content/early/2015/02/03/nar.gkv075.full] | ||
6) | 6) Identification of a new ribose methylation in the 18S rRNA of S. cerevisiae.[http://nar.oxfordjournals.org/content/early/2015/02/03/nar.gkv058.abstract] | ||
7) | 7) Methylation of ribosomal RNA by NSUN5 is a conserved mechanism modulating organismal lifespan.[http://www.ncbi.nlm.nih.gov/pubmed/25635753] | ||
8) | 8) Absolute and relative quantification of RNA modifications via biosynthetic isotopomers.[http://www.ncbi.nlm.nih.gov/pubmed/25129236] | ||
9) Partial methylation at Am100 in 18S rRNA of baker´s yeast shows ribosome heterogeneity on the level of eukaryotic rRNA modification. Plos One [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0089640] | |||
10) Identification of novel methyltransferases, Bmt5 and Bmt6, responsible for the m3U methylations of 25S rRNA in Saccharomyces cerevisiae.[http://nar.oxfordjournals.org/content/early/2013/12/11/nar.gkt1281.full] | |||
11) | 11) Yeast Nop2 and Rcm1 methylate C2870 and C2278 of the 25S rRNA, respectively.[http://www.ncbi.nlm.nih.gov/pubmed/23913415] | ||
12) | 12) Identification of a novel methyltransferase, Bmt2, responsible for the N-1-methyl-adenosine base modification of 25S rRNA in Saccharomyces cerevisiae.[http://www.ncbi.nlm.nih.gov/pubmed/23558746] | ||
13) Association of P2X7 receptor +1513 (A-->C) polymorphism with tuberculosis in a Punjabi population.[http://www.ncbi.nlm.nih.gov/pubmed/20819262] | 13) Yeast Rrp8p, a novel methyltransferase responsible for m1A 645 base modification of 25S rRNA.[http://www.ncbi.nlm.nih.gov/pubmed/23180764] | ||
14) Association of P2X7 receptor +1513 (A-->C) polymorphism with tuberculosis in a Punjabi population.[http://www.ncbi.nlm.nih.gov/pubmed/20819262] | |||
==Conferences/ Workshops== | ==Conferences/ Workshops== |
Revision as of 02:12, 5 December 2016
Contact Info
- Sunny Sharma
- Institute of Molecular Biosciences, Max-von-Laue Strasse-9, Campus Riedberg, Goethe University
- Frankfurt am Main, Hesse, Germany.
- Email me through OpenWetWare
Research Associate at Goethe University, Frankfurt am Main.
Education
- Research Associate at Institute of Molecular Biosciences, Goethe University, Frankfurt am Main, Germany [1]
- 2014, PhD (Biology), Goethe University, Frankfurt am Main, Germany [2]
- 2007, MS (Molecular Biology & Biochemistry), Guru Nanak Dev University, Amritsar, India [3]
- 2005, BS, Bangalore University, Bangalore, India [4]
Awards
EMBO (European Molecular Biology Organisation) Long Term Fellowship. (2014-2016)[5]
DAAD (Deutsche Akademische Austauschdienst) PhD scholarship (2010 - 2013) [6]
CEF (Excellence Cluster-Frankfurt am Main) PhD fellowship (2009 - 2010) [7]
ICMR (Indian Council of Medical Research) Junior Research Fellowship (2009 - 2010) [8]
Research interests
- Ribosome Biogenesis
- RNA modifications
- Developmental Biology
- Immunology
- Gerontology
Publications
1) Tuning the ribosome: the influence of rRNA modification on eukaryotic ribosome biogenesis and function.[9]
2) Ribosome biogenesis factor Tsr3 is the aminocarboxypropyl transferase responsible for 18S rRNA hypermodification in yeast and humans. [10]
3)‘View From A Bridge’: A New Perspective on Eukaryotic rRNA Base Modification.[11]
4) The reverse transcription signature of N-1-methyladenosine in RNA-Seq is sequence dependent.[12]
5) Yeast Kre33 and human NAT10 are conserved 18S rRNA cytosine acetyltransferases that modify tRNAs assisted by the adaptor Tan1/THUMPD1.[13]
6) Identification of a new ribose methylation in the 18S rRNA of S. cerevisiae.[14]
7) Methylation of ribosomal RNA by NSUN5 is a conserved mechanism modulating organismal lifespan.[15]
8) Absolute and relative quantification of RNA modifications via biosynthetic isotopomers.[16]
9) Partial methylation at Am100 in 18S rRNA of baker´s yeast shows ribosome heterogeneity on the level of eukaryotic rRNA modification. Plos One [17]
10) Identification of novel methyltransferases, Bmt5 and Bmt6, responsible for the m3U methylations of 25S rRNA in Saccharomyces cerevisiae.[18]
11) Yeast Nop2 and Rcm1 methylate C2870 and C2278 of the 25S rRNA, respectively.[19]
12) Identification of a novel methyltransferase, Bmt2, responsible for the N-1-methyl-adenosine base modification of 25S rRNA in Saccharomyces cerevisiae.[20]
13) Yeast Rrp8p, a novel methyltransferase responsible for m1A 645 base modification of 25S rRNA.[21]
14) Association of P2X7 receptor +1513 (A-->C) polymorphism with tuberculosis in a Punjabi population.[22]
Conferences/ Workshops
- Plenary talk at 10th Ribosome Synthesis meeting 19th-25th August, Brussels.[23]
- Seminar at RNA club, 16th October 2013 [24]
- Plenary talk at Yeast Meeting, Frankfurt 2013 [25]
- Poster presentation at 18th Annual RNA meeting of the RNA society, Davos, Switzerland [26]
- Seminar at RNA club, 26th September 2012 [27]
- Poster presentation at 9th International Conference on Ribosome Synthesis, Banff, Canada [28]
Useful links
- http://www.muk.uni-frankfurt.de/53895688/033?
- http://www.yeastgenome.org/
- http://www.rnaclub.de
- http://people.biochem.umass.edu/fournierlab/3dmodmap/main.php
- http://modomics.genesilico.pl/
- http://www.rna.icmb.utexas.edu/
- http://espript.ibcp.fr/ESPript/cgi-bin/ESPript.cgi
- http://www.sbg.bio.ic.ac.uk/phyre2/html/page.cgi?id=index