User:Timothee Flutre/Notebook/CR AGAP/2014/01/17: Difference between revisions

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==Bookmarks for grapevine and wine==
==Bookmarks for grapevine and wine==
* '''Motivation''': it could be said of grapevine and wine that they are perfect examples of these hybrids about which Bruno Latour [https://en.wikipedia.org/wiki/We_Have_Never_Been_Modern wrote] a lot. To navigate among wine producers and consumers, researchers and viticulteurs, politicians and journalists, as well as in the midst of berries, genomes, databases, journals, captors and barrels, I made this (never up-to-date) page, hoping it will help me, and maybe others.
* '''Motivation''': it could be said of grapevine and wine that they are perfect examples of these ''hybrids'' about which Bruno Latour [https://en.wikipedia.org/wiki/We_Have_Never_Been_Modern wrote] a lot. To navigate among wine producers and consumers, researchers and viticulteurs, politicians and journalists, as well as in the midst of berries, genomes, databases, journals, captors and barrels, I made this (never up-to-date) page, hoping it will help me, and maybe others.
* '''Research''': mostly public, but not always
* '''Research''': mostly public, but not always
** International: [http://www.vitaceae.org IGGP]
** International: [http://www.vitaceae.org IGGP]
** Europe: [http://www.innovine.eu/home.html innovine], [http://www.plant-phenotyping-network.eu/eppn/index.php?index=6 EPPN] (phenotyping network)
** Europe: [http://www.innovine.eu/home.html innovine], [http://www.plant-phenotyping-network.eu/eppn/index.php?index=6 EPPN] (phenotyping network)
*** France:
*** France:
**** INRA: Montpellier (diversity, genetics, determinants of quality and adaptation to climate change with [http://umr-agap.cirad.fr/en/scientific-teams/diversity-adaptation-and-breeding-of-grapevine/context-and-goals DAAV], genetic collection with [http://www1.montpellier.inra.fr/vassal/ Vassal], oenology with [http://www6.montpellier.inra.fr/spo_eng/ SPO], viticulture and oenology in [http://www1.montpellier.inra.fr/pechrouge/index.php/en/ Pech Rouge]), Colmar ([http://www6.colmar.inra.fr/svqv_eng/Researches resistance], determinants of berry quality and adaptation to climate change for Alsacian wines), Bordeaux ([http://www6.bordeaux-aquitaine.inra.fr/egfv_eng/Research physiology] of grafts and berries), Angers ([http://www.angers-nantes.inra.fr/Les-unites/UVV terroir])
**** INRA:
***** Montpellier: team [http://umr-agap.cirad.fr/en/scientific-teams/diversity-adaptation-and-breeding-of-grapevine/context-and-goals DAAV] of UMR AGAP (diversity, genetics, determinants of quality, adaptation to climate change, breeding), [http://www1.montpellier.inra.fr/vassal/ UE Vassal] (genetic collection), [http://www6.montpellier.inra.fr/spo_eng/ UMR SPO] (oenology), [http://www1.montpellier.inra.fr/pechrouge/index.php/en/ Pech Rouge] (viticulture, oenology)
***** Bordeaux: [http://www6.bordeaux-aquitaine.inra.fr/egfv_eng/Research UMR EGFV] (physiology of berries, grafting), [http://www6.bordeaux-aquitaine.inra.fr/sante-agroecologie-vignoble UMR SAVE] (pathology)
***** Colmar: [http://www6.colmar.inra.fr/svqv_eng/Researches UMR SVQV] (resistance, determinants of berry quality and adaptation to climate change for Alsacian wines)
***** Angers: [http://www.angers-nantes.inra.fr/Les-unites/UVV UMR UVV] (terroir)
**** others: [http://www.vignevin.com/ IFV], [http://www.isvv.univ-bordeauxsegalen.fr/en/ ISVV], [http://www.irstea.fr/en/ IRSTEA], [http://www.franceagrimer.fr/ FranceAgriMer], [http://www.actia-asso.eu/accueil/index.html ACTIA]
**** others: [http://www.vignevin.com/ IFV], [http://www.isvv.univ-bordeauxsegalen.fr/en/ ISVV], [http://www.irstea.fr/en/ IRSTEA], [http://www.franceagrimer.fr/ FranceAgriMer], [http://www.actia-asso.eu/accueil/index.html ACTIA]
*** Germany: Julius Kühn-Institut (JKI) in Siebeldingen ([http://www.jki.bund.de/en/startseite/institute/rebenzuechtung.html breeding] and [http://www.jki.bund.de/en/startseite/institute/pflanzenschutz-obst-und-weinbau.html protection])
*** Germany: Julius Kühn-Institut (JKI) in Siebeldingen ([http://www.jki.bund.de/en/startseite/institute/rebenzuechtung.html breeding] and [http://www.jki.bund.de/en/startseite/institute/pflanzenschutz-obst-und-weinbau.html protection])
*** Italy: Udine ([http://www.appliedgenomics.org/ IGA], [http://www.uniud.it/dipartimenti/disa DISA], [http://vit.entecra.it/ CRA-VIT]), San Michele ([http://www.fmach.it/Servizi-Generali/Programma-Vite FMACH]), Padova (which institute?)
*** Italy: Udine ([http://www.appliedgenomics.org/ IGA], [http://www.uniud.it/dipartimenti/disa DISA], [http://vit.entecra.it/ CRA-VIT]), San Michele ([http://www.fmach.it/Servizi-Generali/Programma-Vite FMACH]), Padova (which institute?)
*** Spain: [http://www.csic.es/web/guest/home;jsessionid=2D76C34A9EC16EE26B3D64A3A5EA0C48 CSIC], [http://www.madrid.org/cs/Satellite?c=CM_InfPractica_FA&cid=1142640481210&idTema=1142598849879&language=es&pagename=ComunidadMadrid%2FEstructura&perfil=1273044216448&pid=1273078188154 IMIDRA]
*** Spain: [http://www.csic.es/web/guest/home;jsessionid=2D76C34A9EC16EE26B3D64A3A5EA0C48 CSIC], [http://www.madrid.org/cs/Satellite?c=CM_InfPractica_FA&cid=1142640481210&idTema=1142598849879&language=es&pagename=ComunidadMadrid%2FEstructura&perfil=1273044216448&pid=1273078188154 IMIDRA]
*** Portugal: [http://www.itqb.unl.pt/~BCV/ UNL-ITQB]
*** Hungary: [http://www.tarcalkutato.hu/ Tokaji Borvidék] ([https://en.wikipedia.org/wiki/Tokaj_wine_region W])
*** Hungary: [http://www.tarcalkutato.hu/ Tokaji Borvidék] ([https://en.wikipedia.org/wiki/Tokaj_wine_region W])
** US: Cornell-Geneva ([http://www.hort.cornell.edu/reisch/grapegenetics/grapeinfo.html breeding]), UC Davis ([http://wineserver.ucdavis.edu/ V&E])
** US: Cornell-Geneva ([http://www.hort.cornell.edu/reisch/grapegenetics/grapeinfo.html breeding]), UC Davis ([http://wineserver.ucdavis.edu/ V&E])
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** China: [http://wine.nwsuaf.edu.cn/ Northwest A&F]
** China: [http://wine.nwsuaf.edu.cn/ Northwest A&F]
* '''Data''':
* '''Data''':
** genomics: [http://plants.ensembl.org/Vitis_vinifera/Info/Index EBI]/[http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=29760 NCBI], [https://urgi.versailles.inra.fr/Species/Vitis URGI], [http://www.genoscope.cns.fr/spip/Vitis-vinifera.html Genoscope], [http://genomics.research.iasma.it/ IASMA]
** genomics: [http://plants.ensembl.org/Vitis_vinifera/Info/Index EBI], [http://www.ncbi.nlm.nih.gov/genome/401 NCBI] ([ftp://ftp.ncbi.nlm.nih.gov/genomes/Vitis_vinifera/ ftp]), [https://urgi.versailles.inra.fr/Species/Vitis URGI], [http://www.genoscope.cns.fr/spip/Vitis-vinifera.html Genoscope], [http://genomics.research.iasma.it/ IASMA]
** genes: [https://www.sdstate.edu/ps/research/vitis/pathways.cfm VitisNet] (pathways), [http://bioinfogp.cnb.csic.es/tools/GrapeGendb/ GrapeGenDb] (probes annotation), [http://vtcdb.adelaide.edu.au/Home.aspx VCTdb] (co-expression), [http://urgi.versailles.inra.fr/GrapeMine/begin.do GrapeMine] (integration), [http://pathways.cgrb.oregonstate.edu/VITIS/class-tree?object=Pathways VitisCyc] (metabolic pathways)
** genes: [https://www.sdstate.edu/ps/research/vitis/pathways.cfm VitisNet] (pathways), [http://bioinfogp.cnb.csic.es/tools/GrapeGendb/ GrapeGenDb] (probes annotation), [http://vtcdb.adelaide.edu.au/Home.aspx VCTdb] (co-expression), [http://urgi.versailles.inra.fr/GrapeMine/begin.do GrapeMine] (integration), [http://pathways.cgrb.oregonstate.edu/VITIS/class-tree?object=Pathways VitisCyc] (metabolic pathways)
** genetics: [http://www.vivc.de/ VIVC], [http://www.eu-vitis.de/index.php EU-Vitis], [https://urgi.versailles.inra.fr/siregal/siregal/card.do?id=5&dbName=siregal&className=genres.administration.GrcImpl SIReGal], [http://bioweb.ensam.inra.fr/reggae/index.php?page=accueil Reggae]
** genetics: [http://www.vivc.de/ VIVC], [http://www.eu-vitis.de/index.php EU-Vitis], [https://urgi.versailles.inra.fr/siregal/siregal/card.do?id=5&dbName=siregal&className=genres.administration.GrcImpl SIReGal], [http://bioweb.ensam.inra.fr/reggae/index.php?page=accueil Reggae]
** collections: European network ([http://eurisco.ecpgr.org/ EURISCO]), French Network of Grapevigne Centers ([http://bioweb.ensam.inra.fr/collections_vigne/index.php bioweb]), USDA ([http://www.ngr.ucdavis.edu/index.cfm NGR], [http://www.ars.usda.gov/Main/docs.htm?docid=12254 NCGR]), [http://plantgrape.plantnet-project.org/catalogues French catalogue], [http://www.vitisdb.it/ Italy], [http://www.deutsche-genbank-reben.jki.bund.de/ Germany], [http://gvd.biology.uoc.gr/gvd/index.htm Grece], [http://www1.unine.ch/svmd/ Switzerland]
** collections: European network ([http://eurisco.ecpgr.org/ EURISCO]), French Network of Grapevigne Centers ([http://bioweb.ensam.inra.fr/collections_vigne/index.php bioweb]), USDA ([http://www.ngr.ucdavis.edu/index.cfm NGR], [http://www.ars.usda.gov/Main/docs.htm?docid=12254 NCGR]), [http://plantgrape.plantnet-project.org/catalogues French catalogue], [http://www.vitisdb.it/ Italy], [http://www.deutsche-genbank-reben.jki.bund.de/ Germany], [http://gvd.biology.uoc.gr/gvd/index.htm Grece], [http://www1.unine.ch/svmd/ Switzerland]
** phenotyping: [http://bioweb.supagro.inra.fr/vitphe/public/?lang=en VIT-PHE], [https://urgi.versailles.inra.fr/ephesis/ephesis/welcome.do Ephesis], [http://www.cropontology.org/ontology/VITIS/Vitis Crop Ontology]
** phenotyping: [http://bioweb.supagro.inra.fr/vitphe/public/?lang=en VIT-PHE], [https://urgi.versailles.inra.fr/ephesis/ephesis/welcome.do Ephesis], [http://www.cropontology.org/ontology/VITIS/Vitis Crop Ontology], [http://www.eu-vitis.de/docs/descriptors/mcpd/WP2-DESCRIPTORS-v4.pdf GrapeGen06 48 descriptors]
** meteo: [http://www.vignevin-lr.com/bulletin-de-sante-du-vegetal/modelisation-mildiou-et-bilan-hydrique/bilan-hydrique.html water deficit] (Languedoc-Roussillon)
** meteo: [http://www.vignevin-lr.com/bulletin-de-sante-du-vegetal/modelisation-mildiou-et-bilan-hydrique/bilan-hydrique.html water deficit] (Languedoc-Roussillon)
** phenology: [http://www.gdr2968.cnrs.fr/spip.php?rubrique29 GDR SIP-GECC]
** phenology: [http://www.gdr2968.cnrs.fr/spip.php?rubrique29 GDR SIP-GECC]
** pathogens: [http://www.vignevin-epicure.com/ EPIcure]
** pathogens: [http://www.vignevin-epicure.com/ EPIcure]
** vini-/viti-/agri-culture: [http://www.si-vitifrance.com/ OVF] (France), [http://faostat3.fao.org/faostat-gateway/go/to/home/E FAOSTAT] (world), [http://agreste.agriculture.gouv.fr/recensement-agricole-2010/ Agreste] (France), [http://www2.ademe.fr/servlet/KBaseShow?sort=-1&cid=96&m=3&catid=25508 Agribalyse] (France)
** vini-/viti-/agri-culture: [http://www.si-vitifrance.com/ OVF] (France), [http://faostat3.fao.org/faostat-gateway/go/to/home/E FAOSTAT] (world), [http://agreste.agriculture.gouv.fr/recensement-agricole-2010/ Agreste] (France), [http://www2.ademe.fr/servlet/KBaseShow?sort=-1&cid=96&m=3&catid=25508 Agribalyse] (France)
** climate data: [https://intranet.inra.fr/climatik/ Climatik] (base managed by the Agroclim unit)
** photos: from INRA ([http://mediatheque.inra.fr/ new], [http://phototheque.inra.fr/ old]), [http://www.shutterstock.com/s/grapevine/search.html Shutterstock]
** photos: from INRA ([http://mediatheque.inra.fr/ new], [http://phototheque.inra.fr/ old]), [http://www.shutterstock.com/s/grapevine/search.html Shutterstock]
** ontologies: [http://www.plantontology.org/ Plant Ontology], [http://www.cropontology.org/ontology/VITIS/Vitis Vitis Crop Ontology]
* '''Institutional''':
* '''Institutional''':
** International: [http://www.oiv.int/ OIV] (Organisation Internationale de la Vigne et du Vin)
** International: [http://www.oiv.int/ OIV] (Organisation Internationale de la Vigne et du Vin), [http://upov.int/ UPOV] ([http://www.upov.int/edocs/tgdocs/en/tg050.pdf DUS guidelines for grapevine])
** Europe: [http://www.cpvo.europa.eu CPVO] (Community Plant Variety Office, OCVV in French)
** Europe: [http://www.cpvo.europa.eu CPVO] (Community Plant Variety Office, OCVV in French)
*** France: [http://www.inao.gouv.fr/ INAO] (Institut National de l'Origine et de la Qualité), [http://www.vignevin.com/recherche/materiel-vegetal/centre-de-selection/partenaires-de-la-selection-vigne.html CTNSP] (Commission Technique Nationale de Sélection et de Participation), [http://www.geves.fr GEVES] (Groupe d'Etude et de contrôle des Variétés Et des Semences), [http://www.geves.fr/index.php?option=com_content&view=article&id=54&Itemid=295&lang=fr INOV] (Instance Nationale des Obtentions Végétales), [http://www.geves.fr/index.php?option=com_content&view=article&id=50&Itemid=290&lang=fr CTPS] (Comité Technique Permanent de la Sélection)
*** France: [http://www.inao.gouv.fr/ INAO] (Institut National de l'Origine et de la Qualité), [http://www.vignevin.com/recherche/materiel-vegetal/centre-de-selection/partenaires-de-la-selection-vigne.html CTNSP] (Commission Technique Nationale de Sélection et de Participation), [http://www.geves.fr GEVES] (Groupe d'Etude et de contrôle des Variétés Et des Semences), [http://www.geves.fr/index.php?option=com_content&view=article&id=54&Itemid=295&lang=fr INOV] (Instance Nationale des Obtentions Végétales), [http://www.geves.fr/index.php?option=com_content&view=article&id=50&Itemid=290&lang=fr CTPS] (Comité Technique Permanent de la Sélection)
Line 42: Line 49:
** International: [http://www.groupe-castel.com/ Castel]
** International: [http://www.groupe-castel.com/ Castel]
** Europe:
** Europe:
*** France: [http://www.cnaoc.org/ CNAOC] (Confédération Nationale des producteurs de vins et eaux de vie de vin à Appellations d’Origine Contrôlées), [http://www.giesco.org GiESCO] (experts), [http://www.dubernet.com/ Dubernet] (lab in oenology), [http://www.winemosaic.org/ Wine Mosaic] (original varieties), [http://www.icv.fr/ ICV] (conseil, oenologie), [http://www.vinseo.com/ VINSEO] (fournisseurs), [http://www.prommata.org/portfiche.php?p=3 PROMMATA], [http://www.bio-dynamie.org/ MABD] (bio-dynamie), [http://www.grab.fr/category/produire-bio/viticulture GRAB] (bio), [http://www.mercier-groupe.com/ Mercier] (pépiniériste), [http://www.sudvinbio.com/ SudVinBio], [http://www.vigneron-independant.com/index2.php Vignerons Indépendants], [http://www.qualenvi.com/Accueil.qualenvi.fr Qualenvi], [http://www.vinternet.net/ Vinternet], [http://www.pleinchamp.com/viticulture PleinChamp], [http://www.worldwide-vineyards.com/ WorldwideVineyards] (grafting), [http://www.winedex.fr/ WineDex] (index via auctions), [http://www.planeteliege.com/ FFL] (liège), [http://www.vegepolys.eu/ VEGEPOLYS] and [http://www.pole-terralia.com/fr/ Terralia] (pôles de compétitivité), [http://www.fevs.com/ FEVS] (exporters)
*** France: [http://www.cnaoc.org/ CNAOC] (Confédération Nationale des producteurs de vins et eaux de vie de vin à Appellations d’Origine Contrôlées), [http://www.giesco.org GiESCO] (experts), [http://www.dubernet.com/ Dubernet] (lab in oenology), [http://www.winemosaic.org/ Wine Mosaic] (original varieties), [http://www.icv.fr/ ICV] (conseil, oenologie), [http://www.vinseo.com/ VINSEO] (fournisseurs), [http://www.prommata.org/portfiche.php?p=3 PROMMATA], [http://www.bio-dynamie.org/ MABD] (bio-dynamie), [http://www.grab.fr/category/produire-bio/viticulture GRAB] (bio), [http://www.mercier-groupe.com/ Mercier] (pépiniériste), [http://www.sudvinbio.com/ SudVinBio], [http://www.vigneron-independant.com/index2.php Vignerons Indépendants], [http://www.qualenvi.com/Accueil.qualenvi.fr Qualenvi], [http://www.vinternet.net/ Vinternet], [http://www.pleinchamp.com/viticulture PleinChamp], [http://www.worldwide-vineyards.com/ WorldwideVineyards] (grafting), [http://www.winedex.fr/ WineDex] (index via auctions), [http://www.planeteliege.com/ FFL] (liège), [http://www.vegepolys.eu/ VEGEPOLYS] and [http://www.pole-terralia.com/fr/ Terralia] (pôles de compétitivité), [http://www.fevs.com/ FEVS] (exporters), [http://www.concoursamphore.fr/ Amphore] ("organic wine" tasting)
*** Italy: [http://www.vivairauscedo.com/ Rauscedo] (nurseryman)
*** Italy: [http://www.vivairauscedo.com/ Rauscedo] (nurseryman)
** North America:
** North America:
Line 51: Line 58:
** easy scientific: [http://www.giesco.org/Pages/40_Conditions-d-abonnement-au-PAV.html PAV], [http://www.oeno.tm.fr/Rdoe/HomeRdoe.html Rdoe]
** easy scientific: [http://www.giesco.org/Pages/40_Conditions-d-abonnement-au-PAV.html PAV], [http://www.oeno.tm.fr/Rdoe/HomeRdoe.html Rdoe]
** non-scientific:
** non-scientific:
*** France: [http://lerougeetleblanc.com/ Le Rouge et le Blanc], [http://www.viti-net.com/ Viti-net], [http://www.lavigne-mag.fr/ LaVigne-Mag]
*** France: [http://lerougeetleblanc.com/ Le Rouge et le Blanc], [http://www.viti-net.com/ Viti-net], [http://www.lavigne-mag.fr/ LaVigne-Mag], [http://www.winepaper.fr/ WinePaper]
* '''Amateur''':
* '''Amateur''':
** [http://www.winetasting-demystified.com/ wine tasting]
** [http://www.winetasting-demystified.com/ wine tasting]

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Bookmarks for grapevine and wine


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