User:Torsten Waldminghaus/qPCR-Primers
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Name | Sequence | Characteristics | Probe set number |
---|---|---|---|
uvrDfw | AGTTCCCGCAGGTGTTTATC | qPCR for uvrD-region on E. coli chromosomewith no GATC-sites (Region B from [1]) | 1 |
uvrDrv | GTCAGCGTCAGTTTCTGCAT | qPCR for uvrD-region on E. coli chromosomewith no GATC-sites (Region B from [1]) | 1 |
uvrDprobe | AGACGCCCGCCTTCATCCAG | HPLC-pure 5'Fam - 3'Tamra qPCR for uvrD-region on E. coli chromosome with no GATC-sites (Region B from [1] | 1 |
yahEFfw | CCATCGAGACGATCAAAGAA | qPCR for yahEF-region on E. coli chromosome with many GATC-sites (Region 2 from [1]) | 2 |
yahEFrv | CAGCATCTGGCTTTGTTGTT | qPCR for yahEF-region on E. coli chromosome with many GATC-sites (Region 2 from [1]) | 2 |
yahEFprobe | AACTCGCGTCCTTCGGCAGC | HPLC5'Fam - 3'Tamra qPCR for yahEF-region on E. coli chromosome with many GATC-sites (Region 2 from [1]) | 2 |
cluster-fw | CTGACTGATGAGATCCAACGA | qPCR for GATC-cluster | 14 |
cluster-rv | CTGGTGCTACGCCTGAATAA | qPCR for GATC-cluster | 14 |
cluster-p | AAATTCGACCCGGCTGTCGC | qPCR for GATC-cluster | 14 |
761139p | CCAGGAAGCCCACGGATTCG | 6 | |
761139fw | GAGATCCTGCCGATGATGTA | 6 | |
761139rv | TTCCAGCAACTCTTTGATCG | 6 | |
797735fw | CGTCCTGGCGTATCGTATC | 4 | |
797735rv | GCATTGTAAGAACCTACAAAGACAA | 4 | |
797735p | TTTGCCGCAGAGTCTGCGCT | 4 | |
1504230fw | CGCCTTCAGTTTATGATCCA | 13 | |
1504230rv | TCGAGAAGTGTTCAAAGCAGA | 13 | |
1504230p | TGATCACCATCGCCTGCTGTTG | 13 | |
1514191fw | ATACTGTTTGGCAGAGGCAA | 12 | |
1514191rv | GGTATGGCTGATGATGTGCT | 12 | |
1514191p | TGACCGGTCAGCGGATCACC | 12 | |
2318305fw | ATAATCACCTACGCGCCTTC | 5 | |
2318305rv | ACCTGCCTGCCTGAATAAAC | 5 | |
2318305p | TGCCGCAGATCACCCTGGTC | 5 | |
2351285fw | ACACATTGCCGAATATGCC | 16 | |
2351285rv | GTTAATGCGGTGATCCATGA | 16 | |
2351285p | CTGCGCATTCGCATGTTCCC | 16 | |
2923803fw | GTCAGCCACCTGCTGAAAT | 15 | |
2923803rv | ATACTGAATTTGGAGCGAACC | 15 | |
2923803p | TGCCTGATCACCCATCAACCAGA | 15 | |
2952960fw | CTACTGTTTCGCGGATCTCA | 8 | |
2952960rv | CAACTGCTTGCAGAACCATT | 8 | |
2952960p | CTGGTGATCACCCGCGCATT | 8 | |
3923874fw | GCCCTGTGGATAACAAGGAT | 18 | |
3923874rv | CCTCATTCTGATCCCAGCTT | 18 | |
3923874p | CGGTCCAGGATCACCGATCATTC | 18 | |
3921366fw | GAGAATATGGCGTACCAGCA | 7 | |
3921366rv | AAGACGCAGGTATTTCGCTT | 7 | |
3921366p | CAACCTGACTTCGGTCCGCG | 7 | |
4301774fw | CTGAATAACTCGCCTCGTGA | 10 | |
4301774rv | ATTCCCGTCTTCATGGTTTC | 10 | |
4301774p | TAAGCGCCGATCACCGGGAT | 10 | |
4321507fw | AGCCAGAGGTGGAGTTAGGA | 9 | |
4321507rv | ACAACCTGAACGATCTGCTG | 9 | |
4321507p | TCTCACCTTTGGCAATGGCGA | 9 | |
ter-fw | TCCTCGCTGTTTGTCATCTT | 17 | |
ter-rv | GGTCTTGCTCGAATCCCTT | 17 | |
ter-p | CATCAGCACCCACGCAGCAA | 17 |