User:Victor Chubukov
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Contact Info
- Victor Chubukov
- JBEI
- 1 Cyclotron Road
- MS 978-4510
- Berkeley, CA 94720
- Personal Webpage
- Email me through OpenWetWare
I work in the Mukhopadhyay Lab at the Joint BioEnergy Institute.
Education
- 2010, PhD, University of California - San Francisco (Joint Graduate Group in Bioengineering with UC-Berkeley)
- 2003, BS, University of Chicago (Mathematics/Computer Science)
Research interests
Systems biology and host engineering for synthetic biology and metabolic engineering. Please read more about my research interests here.
Publications
- Chubukov V, Gerosa L, Kochanowski K, and Sauer U. Coordination of microbial metabolism. Nat Rev Microbiol. 2014 May;12(5):327-40. DOI:10.1038/nrmicro3238 |
- Chubukov V and Sauer U. Environmental dependence of stationary-phase metabolism in Bacillus subtilis and Escherichia coli. Appl Environ Microbiol. 2014 May;80(9):2901-9. DOI:10.1128/AEM.00061-14 |
- Chubukov V, Uhr M, Le Chat L, Kleijn RJ, Jules M, Link H, Aymerich S, Stelling J, and Sauer U. Transcriptional regulation is insufficient to explain substrate-induced flux changes in Bacillus subtilis. Mol Syst Biol. 2013 Nov 26;9:709. DOI:10.1038/msb.2013.66 |
- Kochanowski K, Sauer U, and Chubukov V. Somewhat in control--the role of transcription in regulating microbial metabolic fluxes. Curr Opin Biotechnol. 2013 Dec;24(6):987-93. DOI:10.1016/j.copbio.2013.03.014 |
- Chubukov V, Zuleta IA, and Li H. Regulatory architecture determines optimal regulation of gene expression in metabolic pathways. Proc Natl Acad Sci U S A. 2012 Mar 27;109(13):5127-32. DOI:10.1073/pnas.1114235109 |
- Chin CS, Chubukov V, Jolly ER, DeRisi J, and Li H. Dynamics and design principles of a basic regulatory architecture controlling metabolic pathways. PLoS Biol. 2008 Jun 17;6(6):e146. DOI:10.1371/journal.pbio.0060146 |
- Fawzi NL, Chubukov V, Clark LA, Brown S, and Head-Gordon T. Influence of denatured and intermediate states of folding on protein aggregation. Protein Sci. 2005 Apr;14(4):993-1003. DOI:10.1110/ps.041177505 |
- Fialkowski M, Bishop KJ, Chubukov VA, Campbell CJ, and Grzybowski BA. Architecture and evolution of organic chemistry. Angew Chem Int Ed Engl. 2005 Nov 11;44(44):7263-9. DOI:10.1002/anie.200502272 |