User:Vincent Rouilly

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Vincent Rouilly

Imperial College London
South Kensington SW7 2AZ
London, UK

email: vincent.rouilly (at) imperial (dot) ac (dot) uk

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Education and Past Work Experiences

  • PhD,Department of Bioengineering, Imperial College London.
  • GE Medical Systems, Paris, Software R&D Engineer.
  • Visiospace, Paris, Software R&D Engineer.
  • M.Sc, ENST Paris and ERASMUS exchange at ETSIT Madrid (Signal and Image Processing Major).

Affiliations

Research Interests

  • Computational Biology: stochastic processes, Generalized Petri Nets, Agent Based modelling, Design of Experiments.
  • Contributing to build a Synthetic Biology framework (establishing standards, design for modularity and re-usability, parts characterization) + societal impact of Synthetic Biology.
  • Laboratory Information System.
  • Laboratory Automation


Current Projects

  • Recombineering for Synthetic Biology
    • Homology recombination-based promoter screening construct.
    • Homology recombination-based rolling device integration.
  • Droplet-based Microfluidics for Synthetic Biology
  • Open Source Hardware for Synthetic Biology
    • Arduino-based Peltier controller
    • Colony counting / picking system

Online shared resources

Teaching Experience

OWW Contributions

Other:

Interesting links found on OWW

Useful Open Source Softwares

Cool Open Source Hardware Projects

Recommended Books

Do-It-Yourself / Developing World Technologies for Biological Engineering

General

DNA manipulation

Measuremements and Characterization

Data Acquisition, Control and Lab Automation

OWW ideas (random)

building a stronger community

  • get people to define on their User page their area(s) of interest using 'wiki-categories' (could help to find collaborators).
  • if people defines their area of interest using references, would be interesting to use that information to match people's profiles.

support to find relevant info

  • 'contextual' browsing ('hacking' google-ads-type-of-service to show other relevant wiki-pages or wiki-users on the side of a wiki page ... instead of ads).
  • set essential keywords pages. 'Experts', in a given field, would recommend a set of keywords to help new comers to google more efficiently.
  • setting-up a calendar with info about conferences, workshops, submission deadlines ...

adding features

  • implementing java applets which are enable to read/write an xml-like format into the wiki:
    • image annotation (microscope images, gel analysis, colonies plate ..) see iNote, SVG.
    • graph editor/viewer to build/view/run kinetic models (SBML, CellML ...)

Project

Here is an overview of the modelling framework I am working on: Image:MSMrouilly2.png


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