User:Vincent Rouilly/Open Source Standard Biological Part Registry: Difference between revisions
From OpenWetWare
Jump to navigationJump to search
(New page: __NOTOC__ ==Background== Biological Engineering (or Synthetic Biology) aims at applying an engineering approach to building biological systems. ==Minimum Information for a Standard Biolo...) |
mNo edit summary |
||
Line 27: | Line 27: | ||
===Related Topics=== | ===Related Topics=== | ||
* [ | * [[Minimum_Information_for_Biological_and_Biomedical_Investigations_(MIBBI)]] | ||
==Registry Architecture== | ==Registry Architecture== |
Latest revision as of 04:23, 10 December 2007
Background
Biological Engineering (or Synthetic Biology) aims at applying an engineering approach to building biological systems.
Minimum Information for a Standard Biological Part
Motivations
To enable a web of registries, it would be important to define a standard way of describing a standard biological part. Such a standard description could help the Biological Engineering community in many ways:
- Ease the development of new registries,
- Enable a certain level of connectivity between registries.
- Offer standard interfaces for 3rd parties services.
Draft
- Unique Identifier
- LSID type
- Designer
- Designer name
- Short Description
- Long Description
- Type
- need of an ontology (controlled vocabulary) of standard biological part types.
- Assembly Standard
- like 'BioBrick' or other. Will have an impact on the scare type too.
- DNA Sequence
- Reference
Related Topics
Registry Architecture
Resources
- Persistent Objects
- Object-Oriented Databases
Related links
- MIT Registry website
- Brickit local Biobrick registry