Username Week 8

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Excel Spread Sheet

File:Merrell Compiled Raw Data Vibrio TG10.19.xls

GenMapp

File:Merrell Compiled Raw Data Vibrio TG(2)10.24.txt

Sanity Check

  • How many genes have p value < 0.05? All of the values (5222)
  • < 0.01? about 213
  • < 0.001? 25
  • < 0.0001? None
  • How many genes Pvalue less than .05 and average log fold change greater than 0? about 364
  • How many genes with Pvalue less than .05 and average log fold change less than 0? about 540
  • Average log fold change of greater than .25 or less than -.25? about 940 total
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