Van Oudenaarden Lab:C28C12.8

Progress:

Probes designed: (03-01-2010 - Alexander van Oudenaarden)

Probes coupled:

Probes purified:

Probes tested:

Dyes available:

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>C28C12.8 (hlh-12 spliced coding region) atggcgaagaaaccgagagttaccaagctgaatacggatcgaagatcgagagcaaacgaacgagaacgacagagagtttc cgagatgaacggaatgtttgatgttctacttaatcttcttccgccgtcacattttaaaacacgactctccagagttcaaa tcttgagagaagccacctcttacataattcgtcttcacaactttcttattgaaagttcaaatagtgacatagacgcaata actgtatttccgcacatcttcaacggagaacgcaagtcaaataaagatgcaattcgtcgtcccatgaagttgaagcaggg tggcggtgttgctgctttcatctcacgccacgaacttcccccacttcaacttccaaatcccgttatcccaattttgaagc ccacttcagttccagtttggccccaaaccaatgtttatattgcttatttttaa

attattgagtttgtatttgagttgaatgaagtagaacggttgttcattagtagtttaaaaaaa

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Name of probe set: hlh-12

Probes designed on Mon, 01 Mar 10 14:31:20 -0700

23 probes designed for target of length 516 (target too short for 48 probes)

Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC

actctcggtttcttcgccat, hlh-12_1, 1, 1, 50

ttcgatccgtattcagcttg, hlh-12_2, 2, 24, 45

tctcgttcgtttgctctcga, hlh-12_3, 3, 46, 50

catctcggaaactctctgtc, hlh-12_4, 4, 68, 50

gtagaacatcaaacattccg, hlh-12_5, 5, 90, 40

tgtgacggcggaagaagatt, hlh-12_6, 6, 112, 50

ctctggagagtcgtgtttta, hlh-12_7, 7, 135, 45

gtggcttctctcaagatttg, hlh-12_8, 8, 157, 45

gtgaagacgaattatgtaag, hlh-12_9, 9, 179, 35

ttgaactttcaataagaaag, hlh-12_10, 10, 201, 25

gttattgcgtctatgtcact, hlh-12_11, 11, 223, 40

gttgaagatgtgcggaaata, hlh-12_12, 12, 245, 40

ctttatttgacttgcgttct, hlh-12_13, 13, 267, 35

ttcatgggacgacgaattgc, hlh-12_14, 14, 289, 50

aacaccgccaccctgcttca, hlh-12_15, 15, 311, 60

cgtggcgtgagatgaaagca, hlh-12_16, 16, 333, 55

ggaagttgaagtgggggaag, hlh-12_17, 17, 355, 55

caaaattgggataacgggat, hlh-12_18, 18, 377, 40

aaactggaactgaagtgggc, hlh-12_19, 19, 399, 50

atataaacattggtttgggg, hlh-12_20, 20, 421, 35

ctcaataatttaaaaataag, hlh-12_21, 21, 443, 15

cttcattcaactcaaataca, hlh-12_22, 22, 465, 30

ctactaatgaacaaccgttc, hlh-12_23, 23, 487, 40