Van Oudenaarden Lab:F57C12.3: Difference between revisions
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>F57C12.3 (hlh-19 spliced coding region) | |||
tctgaacataagataacaaaatacttagctttcttcagtattacgtaattggtgatattttataaattcaaa | |||
atgtcacgtgaacgtgctaacgctcgagaacgatgccggcaaaaatcaatcggcaacgcattcaacatgttgcgcaacca | |||
tcttccgaagcaattacgagatcgaaaaccgtcgaaagcggagaccttaaagtcagctgcgcaatatatatctcatctat | |||
tgaggattttggagaaagaaatagaaaactcttcgaataatttaaaagatgaacatcaaaaagaccctagtttgaccacg | |||
ccttcacatctgaattcgaaaattgaagtatgctatgcacaccaaaatggagaatgggtcccgccagaatgtcattttgt | |||
tgtgaactatgattga | |||
atatttatttttattaattgtgtattgttttacccactcatttttatgcaatttttacactaatcaaactttatcaa | |||
aaaaaccaattttctattaataaatgtgaatgaataggtattgc | |||
---- | |||
Name of probe set: hlh-19 | |||
Probes designed on Mon, 01 Mar 10 14:41:31 -0700 | |||
24 probes designed for target of length 529 (target too short for 48 probes) | |||
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC | |||
tttgttatcttatgttcaga, hlh-19_1, 1, 1, 25 | |||
aatactgaagaaagctaagt, hlh-19_2, 2, 23, 30 | |||
tataaaatatcaccaattac, hlh-19_3, 3, 45, 20 | |||
cgttcacgtgacattttgaa, hlh-19_4, 4, 67, 40 | |||
gcatcgttctcgagcgttag, hlh-19_5, 5, 89, 55 | |||
cgttgccgattgatttttgc, hlh-19_6, 6, 111, 45 | |||
tggttgcgcaacatgttgaa, hlh-19_7, 7, 133, 45 | |||
atctcgtaattgcttcggaa, hlh-19_8, 8, 155, 40 | |||
tctccgctttcgacggtttt, hlh-19_9, 9, 177, 50 | |||
tattgcgcagctgactttaa, hlh-19_10, 10, 199, 40 | |||
aatcctcaatagatgagata, hlh-19_11, 11, 221, 30 | |||
agttttctatttctttctcc, hlh-19_12, 12, 243, 30 | |||
tcatcttttaaattattcga, hlh-19_13, 13, 265, 20 | |||
caaactagggtctttttgat, hlh-19_14, 14, 287, 35 | |||
aattcagatgtgaaggcgtg, hlh-19_15, 15, 309, 45 | |||
gcatagcatacttcaatttt, hlh-19_16, 16, 331, 30 | |||
gacccattctccattttggt, hlh-19_17, 17, 353, 45 | |||
caacaaaatgacattctggc, hlh-19_18, 18, 375, 40 | |||
ataaatattcaatcatagtt, hlh-19_19, 19, 397, 15 | |||
aaacaatacacaattaataa, hlh-19_20, 20, 419, 15 | |||
attgcataaaaatgagtggg, hlh-19_21, 21, 441, 35 | |||
ataaagtttgattagtgtaa, hlh-19_22, 22, 463, 20 | |||
taatagaaaattggtttttt, hlh-19_23, 23, 485, 15 | |||
atacctattcattcacattt, hlh-19_24, 24, 507, 25 |
Latest revision as of 14:42, 1 March 2010
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>F57C12.3 (hlh-19 spliced coding region)
tctgaacataagataacaaaatacttagctttcttcagtattacgtaattggtgatattttataaattcaaa
atgtcacgtgaacgtgctaacgctcgagaacgatgccggcaaaaatcaatcggcaacgcattcaacatgttgcgcaacca tcttccgaagcaattacgagatcgaaaaccgtcgaaagcggagaccttaaagtcagctgcgcaatatatatctcatctat tgaggattttggagaaagaaatagaaaactcttcgaataatttaaaagatgaacatcaaaaagaccctagtttgaccacg ccttcacatctgaattcgaaaattgaagtatgctatgcacaccaaaatggagaatgggtcccgccagaatgtcattttgt tgtgaactatgattga
atatttatttttattaattgtgtattgttttacccactcatttttatgcaatttttacactaatcaaactttatcaa aaaaaccaattttctattaataaatgtgaatgaataggtattgc
Name of probe set: hlh-19
Probes designed on Mon, 01 Mar 10 14:41:31 -0700
24 probes designed for target of length 529 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
tttgttatcttatgttcaga, hlh-19_1, 1, 1, 25
aatactgaagaaagctaagt, hlh-19_2, 2, 23, 30
tataaaatatcaccaattac, hlh-19_3, 3, 45, 20
cgttcacgtgacattttgaa, hlh-19_4, 4, 67, 40
gcatcgttctcgagcgttag, hlh-19_5, 5, 89, 55
cgttgccgattgatttttgc, hlh-19_6, 6, 111, 45
tggttgcgcaacatgttgaa, hlh-19_7, 7, 133, 45
atctcgtaattgcttcggaa, hlh-19_8, 8, 155, 40
tctccgctttcgacggtttt, hlh-19_9, 9, 177, 50
tattgcgcagctgactttaa, hlh-19_10, 10, 199, 40
aatcctcaatagatgagata, hlh-19_11, 11, 221, 30
agttttctatttctttctcc, hlh-19_12, 12, 243, 30
tcatcttttaaattattcga, hlh-19_13, 13, 265, 20
caaactagggtctttttgat, hlh-19_14, 14, 287, 35
aattcagatgtgaaggcgtg, hlh-19_15, 15, 309, 45
gcatagcatacttcaatttt, hlh-19_16, 16, 331, 30
gacccattctccattttggt, hlh-19_17, 17, 353, 45
caacaaaatgacattctggc, hlh-19_18, 18, 375, 40
ataaatattcaatcatagtt, hlh-19_19, 19, 397, 15
aaacaatacacaattaataa, hlh-19_20, 20, 419, 15
attgcataaaaatgagtggg, hlh-19_21, 21, 441, 35
ataaagtttgattagtgtaa, hlh-19_22, 22, 463, 20
taatagaaaattggtttttt, hlh-19_23, 23, 485, 15
atacctattcattcacattt, hlh-19_24, 24, 507, 25