Van Oudenaarden Lab:T15H9.3
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>T15H9.3 (hlh-6 spliced coding region)
atgtcaatttcccaaaacaactttttgaccatgttccctgtaacttatacatttgagaatggggtctactcgactattat caaccagaatactattcaaaccccgattccaaatccgattcaacatcatattcaaaatcatattcaaacttcaattccaa atacaaatcttctactggaaaatgttcaaaccgatgtacaaaaactaatggtaccactaatcgatcagcaattccacatt ccaacttccaccccactccaacttgcaccaatcccgactcaaattcaatctcaacttcaaccacaaatatctcaaatacc tattcacaatcaaccacaaattcaaattcaaagccaagttcaacctcaacttcccactcaaagtcagccaaaaccttctt ctaaagcgtcattggacactagctcaaacgcctttaagaaatatgtgaacccatttgcacctgaagctacagtacccctg cctgttgaacttgaagatcaatacggaccatatagctcatcagtttggaaacgaaacgaacgtgagcgatgtcgagtgag aaatgtgaatgatggttatgagagactgagaaaacatcttccagttcattttgatgaaaagcgaatctcaaaagttgaca ctctccggcttgcaatccgttatatcaaacatttggataacttattgaggagcgagcttcatcagtataactgcaagtgc ttcaatggattccaagaggagtccgaaggaaatattttaatcgatatttctacgtttaattttaattcgagtaataatgc tatgtga
Name of probe set: hlh-6
Probes designed on Mon, 01 Mar 10 14:26:22 -0700
36 probes designed for target of length 807 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
gttgttttgggaaattgaca, hlh-6_1, 1, 2, 35
gttacagggaacatggtcaa, hlh-6_2, 2, 25, 45
gaccccattctcaaatgtat, hlh-6_3, 3, 47, 40
tctggttgataatagtcgag, hlh-6_4, 4, 69, 40
ggaatcggggtttgaatagt, hlh-6_5, 5, 91, 45
gaatatgatgttgaatcgga, hlh-6_6, 6, 114, 35
ggaattgaagtttgaatatg, hlh-6_7, 7, 139, 30
ttccagtagaagatttgtat, hlh-6_8, 8, 161, 30
tttgtacatcggtttgaaca, hlh-6_9, 9, 183, 35
tcgattagtggtaccattag, hlh-6_10, 10, 205, 40
agttggaatgtggaattgct, hlh-6_11, 11, 227, 40
gtgcaagttggagtggggtg, hlh-6_12, 12, 249, 60
gagattgaatttgagtcggg, hlh-6_13, 13, 273, 45
tgagatatttgtggttgaag, hlh-6_14, 14, 295, 35
gtggttgattgtgaataggt, hlh-6_15, 15, 318, 40
acttggctttgaatttgaat, hlh-6_16, 16, 340, 30
ttgagtgggaagttgaggtt, hlh-6_17, 17, 362, 45
tagaagaaggttttggctga, hlh-6_18, 18, 384, 40
tgagctagtgtccaatgacg, hlh-6_19, 19, 407, 50
tcacatatttcttaaaggcg, hlh-6_20, 20, 429, 35
gtagcttcaggtgcaaatgg, hlh-6_21, 21, 451, 50
aagttcaacaggcaggggta, hlh-6_22, 22, 473, 50
ctatatggtccgtattgatc, hlh-6_23, 23, 496, 40
gtttcgtttccaaactgatg, hlh-6_24, 24, 518, 40
tcactcgacatcgctcacgt, hlh-6_25, 25, 540, 55
ctcataaccatcattcacat, hlh-6_26, 26, 563, 35
ctggaagatgttttctcagt, hlh-6_27, 27, 585, 40
attcgcttttcatcaaaatg, hlh-6_28, 28, 607, 30
ccggagagtgtcaacttttg, hlh-6_29, 29, 629, 50
gtttgatataacggattgca, hlh-6_30, 30, 651, 35
ctcctcaataagttatccaa, hlh-6_31, 31, 673, 35
gcagttatactgatgaagct, hlh-6_32, 32, 695, 40
cttggaatccattgaagcac, hlh-6_33, 33, 717, 45
aaaatatttccttcggactc, hlh-6_34, 34, 739, 35
attaaacgtagaaatatcga, hlh-6_35, 35, 761, 25
catagcattattactcgaat, hlh-6_36, 36, 785, 30
