Virginia United/2010/Readings

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===Synthetic Biology Overview===
===Synthetic Biology Overview===
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#Building outside the box: iGEM and the BioBricks Foundation and Five hard truths for synthetic biology
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#[http://www.nature.com/nbt/journal/v27/n12/abs/nbt1209-1099.html Building outside the box: iGEM and the BioBricks Foundation] and [http://www.nature.com/news/2010/100120/full/463288a.html Five hard truths for synthetic biology]
#Engineering microbes with synthetic biology frameworks
#Engineering microbes with synthetic biology frameworks
#Synthetic biology: understanding biological design from synthetic circuits
#Synthetic biology: understanding biological design from synthetic circuits
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===Foundational and Fundamental Synthetic Biology===
===Foundational and Fundamental Synthetic Biology===
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#Construction of a genetic toggle switch in Escherichia coli  
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#[http://www.nature.com/nature/journal/v403/n6767/full/403339a0.html Construction of a genetic toggle switch in Escherichia coli ]
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#A synthetic oscillatory network of transcriptional regulators (Repressilator)
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#[http://www.nature.com/nature/journal/v403/n6767/full/403335a0.html A synthetic oscillatory network of transcriptional regulators]
#A modular and extensible RNA-based gene-regulatory platform for engineering cellular function
#A modular and extensible RNA-based gene-regulatory platform for engineering cellular function
#Synthesis of orthogonal transcription-translation networks
#Synthesis of orthogonal transcription-translation networks
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===Advanced and Applied Synthetic Biology===
===Advanced and Applied Synthetic Biology===
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#Automated design of synthetic ribosome binding sites to control protein expression
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#[http://www.nature.com/nbt/journal/v27/n10/abs/nbt.1568.html Automated design of synthetic ribosome binding sites to control protein expression]
#Programming cells by multiplex genome engineering and accelerated evolution
#Programming cells by multiplex genome engineering and accelerated evolution
#Engineering a mevalonate pathway in Escherichia coli for production of terpenoids
#Engineering a mevalonate pathway in Escherichia coli for production of terpenoids

Revision as of 14:48, 22 January 2010

Virginia United 2010

Home        Schedule        Readings        Labs       

Synthetic Biology Overview

  1. Building outside the box: iGEM and the BioBricks Foundation and Five hard truths for synthetic biology
  2. Engineering microbes with synthetic biology frameworks
  3. Synthetic biology: understanding biological design from synthetic circuits
  4. Genome engineering
  5. Next-generation synthetic gene networks
  6. Toward scalable parts families for predictable design of biological circuits
  7. Frameworks for programming biological function through RNA parts and devices
  8. Gene synthesis demystified


Foundational and Fundamental Synthetic Biology

  1. Construction of a genetic toggle switch in Escherichia coli
  2. A synthetic oscillatory network of transcriptional regulators
  3. A modular and extensible RNA-based gene-regulatory platform for engineering cellular function
  4. Synthesis of orthogonal transcription-translation networks
  5. Refinement and standardization of synthetic biological parts and devices
  6. Setting the standard in synthetic biology
  7. Diversity-based model-guided construction of synthetic gene networks with predicted functions
  8. Accurate prediction of gene feedback circuit behavior from component properties


Advanced and Applied Synthetic Biology

  1. Automated design of synthetic ribosome binding sites to control protein expression
  2. Programming cells by multiplex genome engineering and accelerated evolution
  3. Engineering a mevalonate pathway in Escherichia coli for production of terpenoids
  4. Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes
  5. Synthetic protein scaffolds provide modular control over metabolic flux
  6. Engineering the Salmonella type III secretion system to export spider silk monomers
  7. Synthetic Gene Networks That Count
  8. Environmentally controlled invasion of cancer cells by engineered bacteria
  9. A synchronized quorum of genetic clocks
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