Wang:Publications: Difference between revisions
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<center><font face="lucida fax" style= "color:yellow" size="+2">'''Laboratory of Cancer Epigenomics'''</font></center> | <center><font face="lucida fax" style= "color:yellow" size="+2">'''Laboratory of Cancer Epigenomics'''</font></center> | ||
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<center><font face="lucida fax" style= "color:yellow" size="+1">'''Department of Molecular and | <center><font face="lucida fax" style= "color:yellow" size="+1">'''Department of Molecular Virology, Immunology and Medical Genetics, Comprehensive Cancer Center, The Ohio State University'''</font> | ||
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[[Wang | <font face="lucida fax" style="color:#ffffff" size="+1"> '''Home''' </font>]] | [[Wang | <font face="lucida fax" style="color:#ffffff" size="+1"> '''Home''' </font>]] | ||
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* | * <u>Chen Z*</u>, Lan X, <u>Wu D</u>, <u>Sunkel B</u>, Ye Z, Huang J, Liu Z, Clinton SK, Jin VX and <u>Wang Q*</u>. "Ligand-dependent genomic function of glucocorticoid receptor in triple-negative breast cancer" '''Nat Commun''' In press, 2015 (* Corresponding authors). | ||
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* | *Chen K^, <u>Chen Z^</u>, <u>Wu D</u>, Zhang L, Lin X, Su J, Rodriguez B, Xi Y, Xia Z, Chen X, Shi X, <u>Wang Q*</u> and Li W* "Broad H3K4me3 is associated with increased transcription elongation and enhancer activity at tumor-suppressor genes" '''Nat Genet''' In press, 2015 (^first authors, *Corresponding authors). | ||
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*Chen H, Ma J, <u>Sunkel B</u>, Luo A, Ding F, Li Y, He H, Zhang S, Xu C, Jin Q, <u>Wang Q</u>, Liu Z (2013) “S100A14 is a novel modulator of terminal differentiation of esophageal squamous cell carcinoma” '''Mol Cancer Res''' | *Liu H, Tang X, Srivastava A, Pécot T, Daniel P, Hemmelgarn B, Reyes S, Fackler N, Bajwa A, Kladney R, Koivisto C, <u>Chen Z</u>, <u>Wang Q</u>, Huang K, Machiraju R, Sáenz-Robles MT, Cantalupo P, Pipas JM, Leone G (2015) "Redeployment of Myc and E2f1-3 drives Rb-deficient cell cycles" '''Nat Cell Biol''' 17(8):1036-1048 [[http://www.nature.com/ncb/journal/v17/n8/full/ncb3210.html]] | ||
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*He H, Li W, Liyanarachchi S, Srinivas M, Wang Y, Akagi K, Wang Y, <u>Wu D</u>, <u>Wang Q</u>, Jin V, Symer DE, Shen R, Phay J, Nagy R, de la Chapelle A (2015) "Multiple functional variants in long-range enhancer elements contribute to the risk of SNP rs965513 in thyroid cancer" '''Proc Natl Acad Sci U S A''' 112(19):6128-6133 [[http://www.pnas.org/content/112/19/6128.long]] | |||
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*<u>Chen Z</u>^, Lan X^, Thomas-Ahner, JM, <u>Wu D</u>,<u>Liu X</u>, Ye Z, Wang L, <u>Sunkel B</u>, <u>Grenade C</u>, Chen J, Zynger DL, Yan PS, Huang J, Nephew KP, Huang THM, Lin S, Clinton SK, Li W, Jin VX, <u>Wang Q</u> (2015) "Agonist and antagonist switch DNA motifs recognized by human androgen receptor in prostate cancer" '''EMBO J''' 34(4):502-16 (^ first author) [[http://emboj.embopress.org/content/early/2014/12/22/embj.201490306]] | |||
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*<u>Wu D</u>^, <u>Sunkel B</u>^, <u>Chen Z</u>, <u>Liu X</u>, Ye Z, <u>Li Q</u>, <u>Grenade C</u>, <u>Ke J</u>, Chen H, Nephew KP, Huang THM, Liu Z, Jin VX, <u>Wang Q</u> (2014) “Three-tiered role of the pioneer factor GATA2 in promoting androgen-dependent gene expression in prostate cancer” '''Nucleic Acids Res''' 42(6):3607-3622 (^ first author) [[Media:Wu_et_al_NAR_2014.pdf|Full Article]] (Breakthrough Article) [[http://www.oxfordjournals.org/our_journals/nar/breakthrough_articles.html]] | |||
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*Ye Z^, <u>Chen Z</u>^, Lan X, Hara S, <u>Sunkel B</u>, Huang THM, Elnitski L, <u>Wang Q</u>*, Jin VX* (2014) “Computational analysis reveals a correlation of exon-skipping events with splicing, transcription and epigenetic factors” '''Nucleic Acids Res''' 42(5):2856-2869 (^ first author, * corresponding authors) [[Media:Ye_et_al_NAR_2013.pdf|Full Article]] | |||
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*Chen H, Ma J, <u>Sunkel B</u>, Luo A, Ding F, Li Y, He H, Zhang S, Xu C, Jin Q, <u>Wang Q</u>, Liu Z (2013) “S100A14 is a novel modulator of terminal differentiation of esophageal squamous cell carcinoma” '''Mol Cancer Res''' 11(12):1542-1553 [[http://www.ncbi.nlm.nih.gov/pubmed/24107296]] | |||
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*He H, Li W, <u>Wu D</u>, Nagy R, Liyanarachchi S, Akagi K, Jendrzejewski J, Jiao H, Hoag K, Wen B, Srinivas M, Waidyaratne G, Wang R, Wojcicka A, Lattimer IR, Stachlewska E, Czetwertynska M, Dlugosinska J, Gierlikowski W, Ploski R, Krawczyk M, Jazdzewski K, Kere J, Symer DE, Jin V, <u>Wang Q</u>, de la Chapelle A (2013) “Ultra-rare mutation in long-range enhancer predisposes to thyroid carcinoma with high penetrance” '''PLoS One''' 8(5):e61920. [[http://www.ncbi.nlm.nih.gov/pubmed/23690926]] | *He H, Li W, <u>Wu D</u>, Nagy R, Liyanarachchi S, Akagi K, Jendrzejewski J, Jiao H, Hoag K, Wen B, Srinivas M, Waidyaratne G, Wang R, Wojcicka A, Lattimer IR, Stachlewska E, Czetwertynska M, Dlugosinska J, Gierlikowski W, Ploski R, Krawczyk M, Jazdzewski K, Kere J, Symer DE, Jin V, <u>Wang Q</u>, de la Chapelle A (2013) “Ultra-rare mutation in long-range enhancer predisposes to thyroid carcinoma with high penetrance” '''PLoS One''' 8(5):e61920. [[http://www.ncbi.nlm.nih.gov/pubmed/23690926]] | ||
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*<u>Wang Q</u> and Brown M (2009) "Mapping the androgen receptor cistrome" In Tindall DJ and Mohler JL, eds. Androgen Action in Prostate Cancer, New York, NY: Springer Science and Business Media, pp.663-80. [[http://link.springer.com/chapter/10.1007%2F978-0-387-69179-4_28#]] | *<u>Wang Q</u> and Brown M (2009) "Mapping the androgen receptor cistrome" In Tindall DJ and Mohler JL, eds. Androgen Action in Prostate Cancer, New York, NY: Springer Science and Business Media, pp.663-80. [[http://link.springer.com/chapter/10.1007%2F978-0-387-69179-4_28#]] | ||
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*Nwachukwu JC, Mita P, Ruoff R, Ha S, <u>Wang Q</u>, Huang SJ, Taneja SS, Brown M, Gerald WL, Garabedian MJ and Logan SK (2009) "Genome-wide impact of androgen receptor trapped clone-27 loss on androgen-regulated transcription in prostate cancer cells" '''Cancer Res'''.69(7):3140-7. | *Nwachukwu JC, Mita P, Ruoff R, Ha S, <u>Wang Q</u>, Huang SJ, Taneja SS, Brown M, Gerald WL, Garabedian MJ and Logan SK (2009) "Genome-wide impact of androgen receptor trapped clone-27 loss on androgen-regulated transcription in prostate cancer cells" '''Cancer Res'''.69(7):3140-7. [[http://www.ncbi.nlm.nih.gov/pubmed/19318562]] | ||
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*Lupien M, Eeckhoute J, Meyer CA, <u>Wang Q</u>, Zhang Y, Carroll JS, Liu XS, and Brown M (2008) "FoxA1 translates epigenetic signatures into lineage-specific transcription" '''Cell''' 132:958-70. | *Lupien M, Eeckhoute J, Meyer CA, <u>Wang Q</u>, Zhang Y, Carroll JS, Liu XS, and Brown M (2008) "FoxA1 translates epigenetic signatures into lineage-specific transcription" '''Cell''' 132:958-70. [[http://www.ncbi.nlm.nih.gov/pubmed/18358809]] | ||
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*Bao BY, Chuang BF, <u>Wang Q</u>, Kantoff PW, Brown M, Sartor O, and Lee GS (2008) "Regulation of UGT2B15/17 by androgen signaling in prostate cancer cells" '''Prostate''' 68:839-48. | *Bao BY, Chuang BF, <u>Wang Q</u>, Kantoff PW, Brown M, Sartor O, and Lee GS (2008) "Regulation of UGT2B15/17 by androgen signaling in prostate cancer cells" '''Prostate''' 68:839-48. [[http://www.ncbi.nlm.nih.gov/pubmed/18302198]] | ||
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*Agoulnik IU, Bingman WE 3rd, Nakka M, Li W, <u>Wang Q</u>, Liu XS, Brown M, Weigel NL (2008) "Target gene-specific regulation of androgen receptor activity by p42/p44 mitogen-activated protein kinase" '''Mol Endocrinol''' 22: 2420-32. | *Agoulnik IU, Bingman WE 3rd, Nakka M, Li W, <u>Wang Q</u>, Liu XS, Brown M, Weigel NL (2008) "Target gene-specific regulation of androgen receptor activity by p42/p44 mitogen-activated protein kinase" '''Mol Endocrinol''' 22: 2420-32. [[http://www.ncbi.nlm.nih.gov/pubmed/18787043]] | ||
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*<u>Wang Q</u>, Li W, Liu XS, Carroll JS, Jänne OA, Keeton EK, Chinnaiyan AM, Pienta KJ and Brown M (2007) "A hierarchical network of transcription factors governs androgen receptor dependent prostate cancer growth" '''Mol Cell''' 27:380-92 (Featured Article). | *<u>Wang Q</u>, Li W, Liu XS, Carroll JS, Jänne OA, Keeton EK, Chinnaiyan AM, Pienta KJ and Brown M (2007) "A hierarchical network of transcription factors governs androgen receptor dependent prostate cancer growth" '''Mol Cell''' 27:380-92 (Featured Article). [[http://www.ncbi.nlm.nih.gov/pubmed/17679089]] | ||
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*Wang QF, Prabhakar S, <u>Wang Q</u>, Moses AM, Chanan S, Brown M, Eisen MB, Cheng JF, Rubin EM, and Boffelli D (2006) "Primate-specific evolution of an LDLR enhancer" '''Genome Biol''' 7: R68. | *Wang QF, Prabhakar S, <u>Wang Q</u>, Moses AM, Chanan S, Brown M, Eisen MB, Cheng JF, Rubin EM, and Boffelli D (2006) "Primate-specific evolution of an LDLR enhancer" '''Genome Biol''' 7: R68. [[http://www.ncbi.nlm.nih.gov/pubmed/16884525]] | ||
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*Carroll JS, Meyer CA, Song J, Li W, Brodsky AS, Geistlinger TR, Eeckhoute J, Keeton EK, Fertuck KC, Hall GF, <u>Wang Q</u>, Bekiranov S, Sementchenko V, Fox EA, Silver PA, Gingeras TR, Liu XS and Brown M (2006) "Genome wide analysis of estrogen receptor binding sites" '''Nat Genet''' 38:1289-97. | *Carroll JS, Meyer CA, Song J, Li W, Brodsky AS, Geistlinger TR, Eeckhoute J, Keeton EK, Fertuck KC, Hall GF, <u>Wang Q</u>, Bekiranov S, Sementchenko V, Fox EA, Silver PA, Gingeras TR, Liu XS and Brown M (2006) "Genome wide analysis of estrogen receptor binding sites" '''Nat Genet''' 38:1289-97. [[http://www.ncbi.nlm.nih.gov/pubmed/17013392]] | ||
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*<u>Wang Q</u>, Carroll JS and Brown M (2005) "Spatial and temporal recruitment of androgen receptor and its coactivators involves chromosomal looping and polymerase tracking" '''Mol Cell''' 19:631-42. | *<u>Wang Q</u>, Carroll JS and Brown M (2005) "Spatial and temporal recruitment of androgen receptor and its coactivators involves chromosomal looping and polymerase tracking" '''Mol Cell''' 19:631-42. [[http://www.ncbi.nlm.nih.gov/pubmed/16137620]] | ||
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*<u>Wang Q</u>, Udayakumar TS, Vasaitis TS, Brodie AH and Fondell JD(2004) "Mechanistic relationship between androgen receptor polyglutamine tract | *<u>Wang Q</u>, Udayakumar TS, Vasaitis TS, Brodie AH and Fondell JD(2004) "Mechanistic relationship between androgen receptor polyglutamine tract trucation and androgen-dependent transcriptional hyperactivity in prostate cancer cells" '''J Biol Chem''' 279:17319-28. [[http://www.ncbi.nlm.nih.gov/pubmed/14966121]] | ||
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*Wang H, <u>Wang Q</u>, Srivastava RK, Gong SS, Lao L, Fondell JD, Wang JB (2003) "Effects of total glycosides from Baishouwu on human breast and prostate cancer cell proliferation" '''Altern Ther Health Med''' Vol. 9, no. 5:62-66. | *Wang H, <u>Wang Q</u>, Srivastava RK, Gong SS, Lao L, Fondell JD, Wang JB (2003) "Effects of total glycosides from Baishouwu on human breast and prostate cancer cell proliferation" '''Altern Ther Health Med''' Vol. 9, no. 5:62-66. [[http://www.ncbi.nlm.nih.gov/pubmed/14526712]] | ||
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*<u>Wang Q</u>, Dipali S, Ren Y and Fondell JD (2002) "A coregulatory role for the TRAP-Mediator complex in androgen receptor-mediated gene expression"' '''J Biol Chem''' 277:42852-58 | *<u>Wang Q</u>, Dipali S, Ren Y and Fondell JD (2002) "A coregulatory role for the TRAP-Mediator complex in androgen receptor-mediated gene expression"' '''J Biol Chem''' 277:42852-58. [[http://www.ncbi.nlm.nih.gov/pubmed/12218053]] | ||
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*Zhang Y, Fondell JD, <u>Wang Q</u>, Xia X, Cheng A, Lu M, Hamburger AW (2002) "Repression of androgen receptor mediated transcription by the ErbB-3 binding protein" '''Oncogene''' Vol. 21, no. 36: 5609-5618. | *Zhang Y, Fondell JD, <u>Wang Q</u>, Xia X, Cheng A, Lu M, Hamburger AW (2002) "Repression of androgen receptor mediated transcription by the ErbB-3 binding protein" '''Oncogene''' Vol. 21, no. 36: 5609-5618. [[http://www.ncbi.nlm.nih.gov/pubmed/12165860]] | ||
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*<u>Wang Q</u>, Fondell JD (2001) "Generation of a mammalian cell line stably expressing a tetracycline-regulated epitope-tagged human androgen receptor: Implications for steroid hormone receptor research" '''Anal Biochem''' Vol. 289, no. 2: 217-230. | *<u>Wang Q</u>, Fondell JD (2001) "Generation of a mammalian cell line stably expressing a tetracycline-regulated epitope-tagged human androgen receptor: Implications for steroid hormone receptor research" '''Anal Biochem''' Vol. 289, no. 2: 217-230. |
Revision as of 07:08, 14 August 2015
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