Wikiomics:Docking toolbox: Difference between revisions
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Revision as of 21:00, 19 November 2007
Following programs are used for docking small molecules into protein pockets/active sites:
Comercial
- FlexX [1] (both stand alone and Sybyl/MOE module) Sybyl docking tutorial: [2] $$$
- GOLD [3] $$$
- ICM (docking) [4] $$$
- GLIDE [5] $$$
Free/Semi Free??
!! needs verification as of Nov 2006!!
Reviews
- Sperandio O, Miteva MA, Delfaud F, Villoutreix Receptor-based computational screening of compound databases: the main docking-scoring engines.Curr Protein Pept Sci. 2006 Oct;7(5):369-93.
- Muegge, M Rarey - mall molecule docking and scoring Reviews in Computational Chemistry, Dec 2001 [9]
- very good review by Aatu Kaapro Janne Ojanen from 2002: [10]
