IGEM:Melbourne/2008/BioClock/Stage1 Model

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Count 1&2 pathway



This is the model for Stephen's non-binary clock.

  • I wasn't quite sure about the riboswitch bit hence the "dodgy bit". Biologists, is this representation of riboswitch correct? With JDesign, everything is presented as Protein products therefore I used two components to represent the two states of the bioswitch. Also please check the inhibition pathways.

Comments/Suggestions/Modifications (good or nasty all welcome)

  • Suggestion for riboswitch modeling - The lock could be represented as inhibiting the components after it in the mRNA and the key could be represented as inhibiting the lock. That would fairly accurately represent the actual interactions between the components. --Stephen
    • like this? -- jason 31/01/8
      • Looks good to me --Stephen 04/02/08
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