User:Carl Boettiger/Notebook/Comparative Phylogenetics/2010/09/01

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Automated scripts for image uploads. Tag-based generation of a slideshow:

Running the script:

 ./flickr_slideshow *.png

Creates the html code that can be embedded into the notebook for a slideshow those images. Images only get the date-time tag as a unique id.

This one uses the mediawiki plugin. More formatting options could be incorporated of course. (Creates the thumbnail images down the right-hand side).

Flickr Error ( ): PhotoID 4948495209 Flickr Error ( ): PhotoID 4948495397 Flickr Error ( ): PhotoID 4948495377 Flickr Error ( ): PhotoID 4949084108 Flickr Error ( ): PhotoID 4948495319 Flickr Error ( ): PhotoID 4949084050 Flickr Error ( ): PhotoID 4949084018 Flickr Error ( ): PhotoID 4949084074 Flickr Error ( ): PhotoID 4948495433

Good practice/brush up on my regular expressions and bash scripting anyway. Scripts re-upload images each time, even if the image hasn't changed. Makes the photostream confusing but that's only temporary. Could simply add the figures to the version management, might be easier, though doesn't enable things like the slideshow or the social options on a particular figure. Maybe just as well that it's a free account, duplicates whose urls I don't track will be lost to the ether.

Adaptive Dynamics Runs

Above figures correspond to these analytic approximations and coexistence simulations

Now Re-running coexistence simulations on the (-0.2, 0.2) grid and plotting side-by-side with analytics on same parameters; code.

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