User:Jeff Zahir/Notebook/0003

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6/24/2016

Downloaded the following from Genbank:

  • X05342.1
  • X06706.1
  • X00436.1
  • AB182994.1
  • HM594866.1
  • GCA_000001405.22


Pulled into mt16 using BioPython and MySQL on my localhost. Make sure you

  1. open Workbench as administrator
  2. open "Manage Connections" under database
  3. Create a connection called NCBI
  4. Set user, local host password and permissions

7/17/2016

  • Using
  • MySQL Workbench 6.3 (Community)
  • Python 2.7.11
- SciTE Version 3.5.1 as a text editor
  • Running on an ASUS laptop with Windows 10 installed
  • Tried to run a simple query using BioPython with several errors. I need to write script that will load the correct modules and point to the right directories.


Notes

  • Setting up database tools and learning my way around bioinformatics


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