User:Tk/Notebook/MF/2008/09/20

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Mesoplasma florum simplification Main Page
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  • Mfl001
  • dnaA
  • Chromosomal replication initiator protein dnaA
  • Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box):5'-TTATC(C/A)A(C/A)A-3'. DnaA binds to ATP and to acidic phospholipids
  • COG function: Replication, recombination and repair (code L)
  • Location: cytoplasmic
  • Gene sequence
  • Upstream sequence
  • Chromosome position
  • GC content
  • GC skew
  • Essential
  • Preceding gene
  • Following gene
  • Paralogs
  • Swissprot
  • GI number
  • COG ID
  • Other databases: Interpro
  • Pfam domain/function
  • Homologs
  • Similarity: belongs to the dnaA family
  • EC Number
  • Number of amino acids
  • Molecular weight
  • Theoretical pI
  • sequence
  • codon usage
  • Prosite motif:
  • Important sites
  • Signals
  • Transmembrane domains
  • secondary structure prediction
  • observed peptides with mass spec
  • location of viable insertion mutants
  • predicted essentiality
  • PDB accession number
  • structure class: alpha/beta
  • cofactors
  • metal ions
  • Kcat [1/min]
  • specific activity [micromoles/min/mg]
  • Km [mM]
  • substrates
  • products
  • specific reaction
  • references



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