Van Oudenaarden Lab:C10G8.7
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>C10G8.7 (ceh-33 spliced coding region + 3'-UTR)
atgcaactaaactcctcatcgtttcatcctcatcattttacttgcgacacgaccagatactccgaagagcaagttgcatg catttgtgaagcattgtcaaatgatgcgaggaagttgtctcaatttgtttggactgtgctggaacgagatgagatgagaa acaatcagtatattctaaaagctcaagcttttttggcgtttcactcaaataactttaaagaactataccgcataatcgaa tctcatcattttgcatctgagcatcacttgcctctccaagagtggtggctcaatgctcattaccacgaagctgaaaaaat ccgcggacgccaacttggagctgttggaaaatacaggattcgaaggaaatatccacttccaagaactatttgggatggcg aggagactagttattgttttagagataaatctcgagtacttcttcgtgactggtattgccggaattcatatccaagtcca agagagaaaagggagttggctgaaaagacacatctgacagtgacccaagtatctaattggtttaagaatagaaggcaaag ggatagagctggagttcctgagccaaaagattgtctgaaagatattagtgaagaagaagatctgaaattaattcggaaaa ctgcatcaaaactttccaattcattccataatccatcagatttgtcttcctactctgctgcagctgccgccgcaacattt cccggtttttatatgaattacaatgatatgatgattggcgctggtacctcttatcaatctttataa
tgtttattttctatgtaatttctaataaagtccc
Name of probe set: ceh-33
Probes designed on Mon, 01 Mar 10 12:57:31 -0700
37 probes designed for target of length 820 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
cgatgaggagtttagttgca, ceh-33_1, 1, 2, 45
caagtaaaatgatgaggatg, ceh-33_2, 2, 25, 35
ttcggagtatctggtcgtgt, ceh-33_3, 3, 47, 50
cacaaatgcatgcaacttgc, ceh-33_4, 4, 69, 45
ctcgcatcatttgacaatgc, ceh-33_5, 5, 91, 45
ccaaacaaattgagacaact, ceh-33_6, 6, 113, 35
tctcatctcgttccagcaca, ceh-33_7, 7, 135, 50
agaatatactgattgtttct, ceh-33_8, 8, 157, 25
cgccaaaaaagcttgagctt, ceh-33_9, 9, 179, 45
ctttaaagttatttgagtga, ceh-33_10, 10, 201, 25
gattcgattatgcggtatag, ceh-33_11, 11, 223, 40
gatgctcagatgcaaaatga, ceh-33_12, 12, 246, 40
caccactcttggagaggcaa, ceh-33_13, 13, 268, 55
ttcgtggtaatgagcattga, ceh-33_14, 14, 290, 40
ggcgtccgcggattttttca, ceh-33_15, 15, 312, 55
tattttccaacagctccaag, ceh-33_16, 16, 334, 40
tggatatttccttcgaatcc, ceh-33_17, 17, 356, 40
catcccaaatagttcttgga, ceh-33_18, 18, 378, 40
aaacaataactagtctcctc, ceh-33_19, 19, 400, 35
aagtactcgagatttatctc, ceh-33_20, 20, 422, 35
tccggcaataccagtcacga, ceh-33_21, 21, 444, 55
ctctcttggacttggatatg, ceh-33_22, 22, 467, 45
tcttttcagccaactccctt, ceh-33_23, 23, 489, 45
acttgggtcactgtcagatg, ceh-33_24, 24, 511, 50
tctattcttaaaccaattag, ceh-33_25, 25, 533, 25
ctccagctctatccctttgc, ceh-33_26, 26, 555, 55
agacaatcttttggctcagg, ceh-33_27, 27, 577, 45
ttcttcttcactaatatctt, ceh-33_28, 28, 599, 25
ttttccgaattaatttcaga, ceh-33_29, 29, 621, 25
gaattggaaagttttgatgc, ceh-33_30, 30, 643, 35
caaatctgatggattatgga, ceh-33_31, 31, 665, 35
cagctgcagcagagtaggaa, ceh-33_32, 32, 687, 55
aaaccgggaaatgttgcggc, ceh-33_33, 33, 709, 55
catatcattgtaattcatat, ceh-33_34, 34, 731, 20
aagaggtaccagcgccaatc, ceh-33_35, 35, 753, 55
aataaacattataaagattg, ceh-33_36, 36, 775, 15
ctttattagaaattacatag, ceh-33_37, 37, 797, 20
