Van Oudenaarden Lab:ZC64.3
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>ZC64.3c (ceh-18 spliced coding region)
atgaacaccttggagaacacgtttcaatttctcgcagaagtattcgaagccaatggtggttgccttgtcacagaacgtgt cagtccatctttgtcgggagccagcaaacgaaaaagtcgaccggtgaagaggatcatcactgaagacgaagtaatcccag aagaagaagtggtcgaagaagaggaagaagagaaagttgaacagccatcagaagaagtaacatgtccagcaatgcaggta gatgccacggatgcaattctggcatcgctcaggcaaatagcgaataatgatctcagtgagcactgtatcagagaagacga aggcaacacgtcagctgaagtgttctcaaacggaaacggcgaagacatggaacaagccggccttgcgggtactgatttat tacggagagttgctgatatgttacaaggaaatcataatggctcacttaattcgcatttcttgcaacagcaattcgcggcg ttcaaagttgaccccacaccagtttccacaaatggcaatggtcttttgactccgatcactacacaactgtcaccactttt cacatcgactgacgcgttcaattcacctgaaaaattactgcaagcgattatgacaccgtctttaggattccttggcgcaa atggtctgggtaagaaacatattttgaaaatcaaattctattgggttatttcaggtgcttcaaacagtggacttctttct tcacctctgattgctcctagtccgactcttctccaatcgttgatgaacacccccacacaaccgacggcttccttgacgcc taaaaaagctgagaatcggcctccagtagtgtcacaaacgttgaaagcttctaagcgacgattatttgatgatacatcaa gaattgaggcggcgagcatgagcggtgatgatcggattgatatgaatgagctggaagcatttgcacagacgttcaaaaaa cagaggataaagttcggtttcacacaaggcgatgttggtgttgcgctggggaaacgatatggcaccgacttttcacaaac aaccatttcacgtttcgaagcgctgaacctgtcattcaaaaacatgtgcaaactgaggcctttgttgaaggaatggctag cagatgtggagatggcaatcgaaggtggtgcaactgtcacagatctcattgacaaaaagacaattcacaatggcaaccat cacaccattcatcacgttgatgtgagttcactgaacttcagagtaatcacttga
Name of probe set: ceh-18
Probes designed on Mon, 01 Mar 10 08:16:32 -0700
48 probes designed for target of length 1254
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
gtgttctccaaggtgttcat, ceh-18_1, 1, 1, 45
cttcgaatacttctgcgaga, ceh-18_2, 2, 30, 45
gtgacaaggcaaccaccatt, ceh-18_3, 3, 52, 50
caaagatggactgacacgtt, ceh-18_4, 4, 74, 45
actttttcgtttgctggctc, ceh-18_5, 5, 98, 45
tcagtgatgatcctcttcac, ceh-18_6, 6, 124, 45
cttcttctgggattacttcg, ceh-18_7, 7, 147, 45
ttcttcctcttcttcgacca, ceh-18_8, 8, 170, 45
ctgatggctgttcaactttc, ceh-18_9, 9, 192, 45
gcattgctggacatgttact, ceh-18_10, 10, 216, 45
aattgcatccgtggcatcta, ceh-18_11, 11, 239, 45
tattcgctatttgcctgagc, ceh-18_12, 12, 267, 45
atacagtgctcactgagatc, ceh-18_13, 13, 289, 45
acgtgttgccttcgtcttct, ceh-18_14, 14, 312, 50
tccgtttgagaacacttcag, ceh-18_15, 15, 335, 45
ataaatcagtacccgcaagg, ceh-18_16, 16, 381, 45
aacatatcagcaactctccg, ceh-18_17, 17, 403, 45
gtgagccattatgatttcct, ceh-18_18, 18, 426, 40
gctgttgcaagaaatgcgaa, ceh-18_19, 19, 450, 45
tcaactttgaacgccgcgaa, ceh-18_20, 20, 472, 50
atttgtggaaactggtgtgg, ceh-18_21, 21, 494, 45
tcggagtcaaaagaccattg, ceh-18_22, 22, 516, 45
agtggtgacagttgtgtagt, ceh-18_23, 23, 538, 45
aattgaacgcgtcagtcgat, ceh-18_24, 24, 564, 45
gtgtcataatcgcttgcagt, ceh-18_25, 25, 597, 45
ttgcgccaaggaatcctaaa, ceh-18_26, 26, 621, 45
atatgtttcttacccagacc, ceh-18_27, 27, 643, 40
gaagcacctgaaataaccca, ceh-18_28, 28, 682, 45
gtgaagaaagaagtccactg, ceh-18_29, 29, 705, 45
attggagaagagtcggacta, ceh-18_30, 30, 738, 45
tgtgtgggggtgttcatcaa, ceh-18_31, 31, 760, 50
tttttaggcgtcaaggaagc, ceh-18_32, 32, 787, 45
tttgtgacactactggaggc, ceh-18_33, 33, 819, 50
cgtcgcttagaagctttcaa, ceh-18_34, 34, 841, 45
ccgcctcaattcttgatgta, ceh-18_35, 35, 873, 45
tatcaatccgatcatcaccg, ceh-18_36, 36, 903, 45
gcaaatgcttccagctcatt, ceh-18_37, 37, 925, 45
cctctgttttttgaacgtct, ceh-18_38, 38, 947, 40
ccttgtgtgaaaccgaactt, ceh-18_39, 39, 970, 45
aagtcggtgccatatcgttt, ceh-18_40, 40, 1012, 45
gcttcgaaacgtgaaatggt, ceh-18_41, 41, 1042, 45
gcctcagtttgcacatgttt, ceh-18_42, 42, 1080, 45
gctagccattccttcaacaa, ceh-18_43, 43, 1102, 45
ttcgattgccatctccacat, ceh-18_44, 44, 1124, 45
tgagatctgtgacagttgca, ceh-18_45, 45, 1149, 45
ggttgccattgtgaattgtc, ceh-18_46, 46, 1179, 45
tcaacgtgatgaatggtgtg, ceh-18_47, 47, 1201, 45
ctctgaagttcagtgaactc, ceh-18_48, 48, 1224, 45
