BME100 f2013:W900 Group15 L4: Difference between revisions
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The function of the template DNA during PCR reaction is to create a complimentary strand to result in one DNA strand that will convert into two. Primers are used when one attaches to one end of the segment and the primer attaches to the bottom strand of the other end. The Taq polymerase copies a cell's DNA before it divides in two. Magnesium chloride is important to the reaction as it is added to allow the presence of magnesium into the reaction as it acts a catalyst as the reaction cannot proceed without magnesium. The deoxyribonucleotides grab nucleotides that are floating in the liquid around it and attaches them to the end of the primer. | The function of the template DNA during PCR reaction is to create a complimentary strand to result in one DNA strand that will convert into two. Primers are used when one attaches to one end of the segment and the primer attaches to the bottom strand of the other end. The Taq polymerase copies a cell's DNA before it divides in two. Magnesium chloride is important to the reaction as it is added to allow the presence of magnesium into the reaction as it acts a catalyst as the reaction cannot proceed without magnesium. The deoxyribonucleotides grab nucleotides that are floating in the liquid around it and attaches them to the end of the primer. | ||
''' | '''Steps of thermal cycling''' | ||
During the initial step of 95 degrees Celsius for 3 minutes, the temperature is raised to near boiling to allow separation to occur. During the step of Denature at 95 degrees Celsius for 30 seconds, the double stranded DNA separates or denatures into single strands. During the process of anneal at 57 degrees Celsius for 30 seconds, the primers bind or anneal to complimentary matches on the target DNA sequence. During the process of extend, the enzyme Taq polymerase binds to the prime sequences and adds nucleotides to extend the second strand. During the final step at 72 degrees celsius for 3 minutes, the target sequence defined by the primers begins to accumulate. During the final hold of four degrees Celsius, copies of the target sequence are produced from a single starting molecule. During the base-pairing of the bonding, Adenine (A) sticks to Thymine (T), while Cytosine (C) sticks to Guanine (G). | |||
(Add a write-up, essay-style, organized into paragrpahs with descriptive headers, based on the Q&A's from Section three of your worksheet)<br> | (Add a write-up, essay-style, organized into paragrpahs with descriptive headers, based on the Q&A's from Section three of your worksheet)<br> | ||
Revision as of 19:47, 28 October 2013
BME 100 Fall 2013 | Home People Lab Write-Up 1 | Lab Write-Up 2 | Lab Write-Up 3 Lab Write-Up 4 | Lab Write-Up 5 | Lab Write-Up 6 Course Logistics For Instructors Photos Wiki Editing Help | ||||||||||||||
OUR TEAMLAB 1 WRITE-UPInitial Machine TestingThe Original Design
When we unplugged (part 3) from (part 6), the machine ... (did what? fill in your answer) When we unplugged the white wire that connects (part 6) to (part 2), the machine ... (did what? fill in your answer)
(Write the date you first tested Open PCR and your experience(s) with the machine)
ProtocolsThermal Cycler Program
Research and DevelopmentPCR - The Underlying Technology Function of each component in PCR reaction"' The function of the template DNA during PCR reaction is to create a complimentary strand to result in one DNA strand that will convert into two. Primers are used when one attaches to one end of the segment and the primer attaches to the bottom strand of the other end. The Taq polymerase copies a cell's DNA before it divides in two. Magnesium chloride is important to the reaction as it is added to allow the presence of magnesium into the reaction as it acts a catalyst as the reaction cannot proceed without magnesium. The deoxyribonucleotides grab nucleotides that are floating in the liquid around it and attaches them to the end of the primer. Steps of thermal cycling During the initial step of 95 degrees Celsius for 3 minutes, the temperature is raised to near boiling to allow separation to occur. During the step of Denature at 95 degrees Celsius for 30 seconds, the double stranded DNA separates or denatures into single strands. During the process of anneal at 57 degrees Celsius for 30 seconds, the primers bind or anneal to complimentary matches on the target DNA sequence. During the process of extend, the enzyme Taq polymerase binds to the prime sequences and adds nucleotides to extend the second strand. During the final step at 72 degrees celsius for 3 minutes, the target sequence defined by the primers begins to accumulate. During the final hold of four degrees Celsius, copies of the target sequence are produced from a single starting molecule. During the base-pairing of the bonding, Adenine (A) sticks to Thymine (T), while Cytosine (C) sticks to Guanine (G).
(Add a write-up, essay-style, organized into paragrpahs with descriptive headers, based on the Q&A's from Section three of your worksheet) (BONUS points: Use a program like Powerpoint, Word, Illustrator, Microsoft Paint, etc. to illustrate how primers bind to the cancer DNA template, and how Taq polymerases amplify the DNA. Screen-captures from the PCR video/ tutorial might be useful. Be sure to credit the sources if you borrow images.)
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