Dahlquist:Edge Software Protocol

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This protocol is for running the Edge software for DNA microarray data anlysis.

Directions for Running Edge at the Keck Lab

• Login with your Keck lab username to mason (the names of the machines are on the lower-left corner of the login screens).
• Right-click on the green tabula rasa.
• Choose Terminal.
• Type:

cd Desktop/edge_1.1.290
R

• At this point, the R prompt shows up. Type:

source("edge.r")
edge()

• The Edge GUI should now appear.