Dahlquist:Notebook/Nutrigenomics/2010/02/24: Difference between revisions
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#WT12 vs. TRAMPtreatTumors24 | #WT12 vs. TRAMPtreatTumors24 | ||
*The following criterion was set in GenMAPP | *The following criterion was set in GenMAPP | ||
For increased-LogFC>0. | For increased-LogFC>0.25 and P-value <0.05 | ||
For decreased-LogFC<-0 | For decreased-LogFC<-0.25 and P-value <0.05 | ||
*Colors were set-increased Red and decreased Green | *Colors were set-increased Red and decreased Green | ||
*Once the color sets were set I proceeded on to the MAPPFinder program | |||
=MAPPFinder= | |||
*From GenMAPP I accessed MAPPFinder and followed the protocol from the bioinformatics lab for each of the four color sets that I ran | |||
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Revision as of 12:04, 24 February 2010
 Nutrigenomics
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2/24/10GenMAPP Day 2
For increased-LogFC>0.25 and P-value <0.05
For decreased-LogFC<-0.25 and P-value <0.05
MAPPFinder
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